PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023005783.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 475aa MW: 53380.4 Da PI: 5.969

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023005783.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	78.6	9.4e-25	119	218	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpy 81 +Wt+ +v++Li+a+ +++++ ++++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++++ + XP_023005783.1 119 KWTDMMVRLLITAVFYIGDEGGTEQadhagkkkpvgllQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVVENQTL 213 7******************99877788889999999******************************************559*****9 PP trihelix 82 fdqle 86 +d++e XP_023005783.1 214 LDSME 218 99997 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MESDSLGGDC GGGGGGGGGG GGGMFSGMNS AMLGLDLPLH PHPTNPPNSH QLHHPSMVSY 60 VPQKPQLQQQ PPPTAVRYPY PAKPKPQQSN LSDDEEQGFA VEDGNSDGKK KISPWQRMKW 120 TDMMVRLLIT AVFYIGDEGG TEQADHAGKK KPVGLLQKKG KWKSVSRAMM EKGFYVSPQQ 180 CEDKFNDLNK RYKRVNDILG KGTACRVVEN QTLLDSMELT PKTKEEVRKL LNSKHLFFRE 240 MCAYHNTCRH STGNNGGGGA HPSPDTAAEP PSHLQQHQQQ QQQQQRCFHA TETAAAAATV 300 GADGDDDDED DEEDESEEDE DDEEEEEIEG TSRGHEEEDE TESRKRARKG GIAVAAVAAM 360 QQLNAEVIGV LQDGGRSLWE KKQWMKSRLI QLEEQQVKYQ SQAFELEKQR LKWLKFRSKK 420 ERDMERAKLE NEKRRLETER MVLMVKQKEL DWMDMHHYQQ QHSSNKRGDP SSITG

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MESDSLGGDC GGGGGGGGGG GGGMFSGMNS AMLGLDLPLH PHPTNPPNSH QLHHPSMVSY  60
VPQKPQLQQQ PPPTAVRYPY PAKPKPQQSN LSDDEEQGFA VEDGNSDGKK KISPWQRMKW  120
TDMMVRLLIT AVFYIGDEGG TEQADHAGKK KPVGLLQKKG KWKSVSRAMM EKGFYVSPQQ  180
CEDKFNDLNK RYKRVNDILG KGTACRVVEN QTLLDSMELT PKTKEEVRKL LNSKHLFFRE  240
MCAYHNTCRH STGNNGGGGA HPSPDTAAEP PSHLQQHQQQ QQQQQRCFHA TETAAAAATV  300
GADGDDDDED DEEDESEEDE DDEEEEEIEG TSRGHEEEDE TESRKRARKG GIAVAAVAAM  360
QQLNAEVIGV LQDGGRSLWE KKQWMKSRLI QLEEQQVKYQ SQAFELEKQR LKWLKFRSKK  420
ERDMERAKLE NEKRRLETER MVLMVKQKEL DWMDMHHYQQ QHSSNKRGDP SSITG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	1e-107	Trihelix family protein