PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023005743.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 238aa MW: 27045.3 Da PI: 5.7579 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.5 | 6.2e-20 | 66 | 119 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ ++++eql+ Le+ F+++ +++ +++++LAk+lgL+ rq+ vWFqNrRa++k XP_023005743.1 66 KKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWK 119 45679************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 121.3 | 5e-39 | 65 | 157 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekk+rls+eq+ +LE+sF+ee kL+p+rK++la+eLglqprq+avWFqnrRAR+k+kqlE+ y++Lk+++da+++e+++L++ev +L++ l+e XP_023005743.1 65 EKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRE 157 69**************************************************************************************98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MEWATGSFRP FVSRAPESSF GFLYNYNLEQ YQGIDVKHSA MAGASETVLQ GLVPGMDMNS 60 YGNLEKKKRL SSEQLDSLEQ SFQEEIKLDP DRKQKLAKEL GLQPRQIAVW FQNRRARWKA 120 KQLEHLYDTL KQEFDAISRE KHKLQEEVMK LKSMLRELQT ARNQVSTVYT ELSGEETVES 180 TSVGAGCSSK PSAAAVAEAA ANQYPTPPEQ CNYVFNTEEY NPMSPTFWGT LPSSYHPQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 66 | 95 | KKKRLSSEQLDSLEQSFQEEIKLDPDRKQK |
2 | 114 | 122 | RRARWKAKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 2e-43 | HD-ZIP family protein |