PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023005377.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 532aa    MW: 59415.1 Da    PI: 5.0123
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023005377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS435.15.1e-1331635312373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     +e L +cA+a+ ++d+ + ++l+++l+ ++s +g p+qRl ay++eAL ar a+s+s++ykal+++e      se l+++++++ev+P++kf++l
  XP_023005377.1 163 KEMLCACARAIGENDMLAGEWLISELRGMVSVSGAPIQRLGAYLLEALVARTASSGSTIYKALRCKEPI---GSELLSYMNILYEVCPYFKFGYL 254
                     789*****************************************************************9...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                      aN aI ea++ge+rvHiiDf+i+qG QW++L+qaLa+Rp+gpp++ iTg+++++s   +   +e +++rL+++Ae+l vpfef+  +a + +++
  XP_023005377.1 255 SANGAIAEAIKGENRVHIIDFQIGQGNQWMTLMQALANRPGGPPKITITGIDDSTSAfsRGGDVEIVAKRLSNLAESLMVPFEFHG-IAGSASEI 348
                     *****************************************************998899999************************.6999**** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +le+L+v+pgEa+aVn++l lh++ desv+++++rd++L+lvkslsPkvv+vveqe++ n+++F+ rfl++l+yy+a+f+s++++lpre+++ri+
  XP_023005377.1 349 QLEDLKVQPGEAIAVNFALVLHHMTDESVDSPNHRDRILRLVKSLSPKVVTVVEQESNNNTAPFFPRFLQTLNYYTAIFESIDMTLPREHKQRIN 443
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     vE+++l+r+ivn+vacegaer+erhe l+kWr+r+ +aGF+p pls ++++++++ll+++ +  y++ee++g+l+lgW +++Lv+ SaW
  XP_023005377.1 444 VEQHCLARDIVNIVACEGAERVERHELLGKWRSRFLMAGFEPHPLSPFVNATIEALLKNYCD-KYTLEERDGALYLGWLNQNLVTSSAW 531
                     ************************************************************95.5************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 532 aa     Download sequence    
MQEASRKKVS DQSHRFYEQP QQELGSYYWP PINQNHLPSE AFNPYCNLES SLGTSSYPPQ  60
NSSSTVSLTS NGSPSHQECH SYPLEPYYSP DNNRGSPVSK SCLTDDADDD LRHKIRELEI  120
AILGPDSEMF DIYSVSNPVN LVLSEQEAGW KDVAEIISRR DLKEMLCACA RAIGENDMLA  180
GEWLISELRG MVSVSGAPIQ RLGAYLLEAL VARTASSGST IYKALRCKEP IGSELLSYMN  240
ILYEVCPYFK FGYLSANGAI AEAIKGENRV HIIDFQIGQG NQWMTLMQAL ANRPGGPPKI  300
TITGIDDSTS AFSRGGDVEI VAKRLSNLAE SLMVPFEFHG IAGSASEIQL EDLKVQPGEA  360
IAVNFALVLH HMTDESVDSP NHRDRILRLV KSLSPKVVTV VEQESNNNTA PFFPRFLQTL  420
NYYTAIFESI DMTLPREHKQ RINVEQHCLA RDIVNIVACE GAERVERHEL LGKWRSRFLM  480
AGFEPHPLSP FVNATIEALL KNYCDKYTLE ERDGALYLGW LNQNLVTSSA WI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein