PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023005376.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GRAS | ||||||||
Protein Properties | Length: 532aa MW: 59415.1 Da PI: 5.0123 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 435.1 | 5.1e-133 | 163 | 531 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 +e L +cA+a+ ++d+ + ++l+++l+ ++s +g p+qRl ay++eAL ar a+s+s++ykal+++e se l+++++++ev+P++kf++l XP_023005376.1 163 KEMLCACARAIGENDMLAGEWLISELRGMVSVSGAPIQRLGAYLLEALVARTASSGSTIYKALRCKEPI---GSELLSYMNILYEVCPYFKFGYL 254 789*****************************************************************9...9********************** PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189 aN aI ea++ge+rvHiiDf+i+qG QW++L+qaLa+Rp+gpp++ iTg+++++s + +e +++rL+++Ae+l vpfef+ +a + +++ XP_023005376.1 255 SANGAIAEAIKGENRVHIIDFQIGQGNQWMTLMQALANRPGGPPKITITGIDDSTSAfsRGGDVEIVAKRLSNLAESLMVPFEFHG-IAGSASEI 348 *****************************************************998899999************************.6999**** PP GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284 +le+L+v+pgEa+aVn++l lh++ desv+++++rd++L+lvkslsPkvv+vveqe++ n+++F+ rfl++l+yy+a+f+s++++lpre+++ri+ XP_023005376.1 349 QLEDLKVQPGEAIAVNFALVLHHMTDESVDSPNHRDRILRLVKSLSPKVVTVVEQESNNNTAPFFPRFLQTLNYYTAIFESIDMTLPREHKQRIN 443 *********************************************************************************************** PP GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 vE+++l+r+ivn+vacegaer+erhe l+kWr+r+ +aGF+p pls ++++++++ll+++ + y++ee++g+l+lgW +++Lv+ SaW XP_023005376.1 444 VEQHCLARDIVNIVACEGAERVERHELLGKWRSRFLMAGFEPHPLSPFVNATIEALLKNYCD-KYTLEERDGALYLGWLNQNLVTSSAW 531 ************************************************************95.5************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 532 aa Download sequence |
MQEASRKKVS DQSHRFYEQP QQELGSYYWP PINQNHLPSE AFNPYCNLES SLGTSSYPPQ 60 NSSSTVSLTS NGSPSHQECH SYPLEPYYSP DNNRGSPVSK SCLTDDADDD LRHKIRELEI 120 AILGPDSEMF DIYSVSNPVN LVLSEQEAGW KDVAEIISRR DLKEMLCACA RAIGENDMLA 180 GEWLISELRG MVSVSGAPIQ RLGAYLLEAL VARTASSGST IYKALRCKEP IGSELLSYMN 240 ILYEVCPYFK FGYLSANGAI AEAIKGENRV HIIDFQIGQG NQWMTLMQAL ANRPGGPPKI 300 TITGIDDSTS AFSRGGDVEI VAKRLSNLAE SLMVPFEFHG IAGSASEIQL EDLKVQPGEA 360 IAVNFALVLH HMTDESVDSP NHRDRILRLV KSLSPKVVTV VEQESNNNTA PFFPRFLQTL 420 NYYTAIFESI DMTLPREHKQ RINVEQHCLA RDIVNIVACE GAERVERHEL LGKWRSRFLM 480 AGFEPHPLSP FVNATIEALL KNYCDKYTLE ERDGALYLGW LNQNLVTSSA WI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 0.0 | GRAS family protein |