PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023005303.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 771aa    MW: 84794.1 Da    PI: 5.4995
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023005303.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS327.23.1e-1004097702374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++L+++Ae v + +++ aq +Larl+++ sp g+p+qR+a+yf+eAL+  l+   ++ ++  pp+  ++ +++ ++ a+k+fse+sP+++f ++
  XP_023005303.1 409 LDQLYKAAELVGTWNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLLLV--NNPVNPPPPRCPTPCDVIFKMGAYKVFSEISPLIQFVNF 501
                     679************************************************998..6777788999999999*********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                     t+Nqa+lea++  +r+Hi+Dfdi+ G+QW++++q+L+ R++g+psl+iT+++sp++++  el  ++++L++fA+ +g++fef+v+   ++++l+ 
  XP_023005303.1 502 TCNQALLEALDDVDRIHIVDFDIGFGAQWASFMQELSLRNQGAPSLKITAFASPSTHHPIELGLMRDNLTQFANDIGISFEFEVV---NFDSLNQ 593
                     ************************************************************************************8...5555554 PP

            GRAS 192 eeL..rvkp...gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281
                     +++   +++   +Ea+aVn+ l   +  ++++ l+s    +L+++k+lsPk+vv  ++ +d+++ +F +++l+al+ y  l++sl+a    +s++
  XP_023005303.1 594 NSFslPFSRaseNEAIAVNFPL--WSSSNQPAMLPS----LLRFIKQLSPKIVVSLDRGCDRSDLPFPQHMLQALQSYINLLESLDAI-NMNSDA 681
                     444223333555*******999..555566777777....*********************************************887.7899** PP

            GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +k+Er+ll+++i++ v  + +      e++  W+  + +aG++pv++s+++++qa+++ ++++++g++ve++++slv++W++r+L+s+SaWr
  XP_023005303.1 682 INKIERFLLQPRIESTVLGRLRV----PERMPLWKTLFASAGYTPVTFSNFTETQAECVAKRTSVRGFHVEKRQASLVFCWQRRELISASAWR 770
                     *****************998887....9999*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 771 aa     Download sequence    
MRGIPFQFQG KGELEISAAF SSPICSGKWV KKGEQQQQQQ QQQEAEEEAE GLSYFVLPNN  60
EPTSVLHMRS PSPPTSASTL SSSFGGGAGG GCVPSFPPET PSVEPLPGAG IGTPIFPGGL  120
ERCGVGLEDL ESMWTESAGP EQSFLRWIAG DVVEDPSLGI KTVLQNGNIP FDMDSNGSMG  180
IVDQGSEFDP AAAAAAGNVL SNINPNLSFP VAAACTGFSD VNGSNNKPFS RTTYKSSCLG  240
LNNRHGNFNV QNPIFSGSVE NLVVPVSAMI YPPQLPPFEA PDEKPQNLNA QVLLNQHQQH  300
PQNSNFFVPL AFGQPEQQLQ PQLKRHNSSG GVDPNGAIPK VPFMDPGNEM FLRNHQQVLQ  360
QQQQLGYPLG LQFLPQQKAM LPKPKVIGLG DNEMAYQNPP QQQQQHALLD QLYKAAELVG  420
TWNFSHAQGI LARLNHQLSP VGKPLQRAAF YFKEALQLLL LVNNPVNPPP PRCPTPCDVI  480
FKMGAYKVFS EISPLIQFVN FTCNQALLEA LDDVDRIHIV DFDIGFGAQW ASFMQELSLR  540
NQGAPSLKIT AFASPSTHHP IELGLMRDNL TQFANDIGIS FEFEVVNFDS LNQNSFSLPF  600
SRASENEAIA VNFPLWSSSN QPAMLPSLLR FIKQLSPKIV VSLDRGCDRS DLPFPQHMLQ  660
ALQSYINLLE SLDAINMNSD AINKIERFLL QPRIESTVLG RLRVPERMPL WKTLFASAGY  720
TPVTFSNFTE TQAECVAKRT SVRGFHVEKR QASLVFCWQR RELISASAWR C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-125GRAS family protein