PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023004832.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 300aa MW: 34282.5 Da PI: 5.7725

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023004832.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	62.1	1.3e-19	29	118	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt+qe+ Li+a++e++ +l+rg+lk +Weev+ + ++ +++++qC++k+e+l++r++ +k++ +t +sss++ yf+ ++ XP_023004832.1 29 WTHQETVNLIQAYQEKWYALERGQLKSSQWEEVAVTVaarcgySHFDPSKTSVQCRHKMEKLRQRFRSEKHRLAIGT-QSSSRWLYFELMN 118 ********************************9998655544445589********************995.66679***997 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MATPPPAPLS STKSISTVAT TEKVQPIPWT HQETVNLIQA YQEKWYALER GQLKSSQWEE 60 VAVTVAARCG YSHFDPSKTS VQCRHKMEKL RQRFRSEKHR LAIGTQSSSR WLYFELMNNL 120 LRGPLPISAR PMSSIPFDND EEDQTAEKSD NYNSDYEEEE KNHSKSKSIS NILRRPIAFD 180 GSSSRRRNRN SSEDDEDDEE EADIRVSRFP EEDLAGEAAV AEEGKEMCSK LAAEIRLFAD 240 RLVGMESLKM EMMKEAEMNR IAMENRRIEM ILESEKKIVN SIAKAFGSPP PKRLKIGHDP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24860.1	1e-29	Trihelix family protein