PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023004772.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 520aa    MW: 58414.7 Da    PI: 6.2723
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023004772.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS309.48.2e-951555131374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                     l++lL+ec  a+s ++l +a+++L +l ++asp+g ++ +R+++yf+ A+++r+ +s  ++++ l          ++  +++++f++vsP+lkf+
  XP_023004772.1 155 LISLLFECSVAISVDNLVEAHRMLLELTQMASPYGqSSAERVVTYFAAAMSSRVINSILGICSPLLD-------YKSISNSFQIFNNVSPLLKFA 242
                     5799*******************************889******************77777754432.......345567899************ PP

            GRAS  95 hltaNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                     hl+ Nq+Ile+++++ + +HiiD+di+qG+QWp+L+qaL+++   + + ++RiT++g       e l  tg++L+++A++lg++fe+n+ +a+++
  XP_023004772.1 243 HLASNQTILESLSQCvDPIHIIDLDIMQGIQWPPLFQALTTKMddSRSRHVRITAMGT----TMELLLDTGKQLSNIARQLGISFEYNP-IATKV 332
                     ***************9**************************9666678*********....99*************************.79*** PP

            GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281
                      ++++++ ++++gE+++Vn+v   h l+d +++  +    +L l+++l Pk++++veq++ h ++s+l+rf+++l+yysa+fdsl a l++++++
  XP_023004772.1 333 GKVDISMVKLRQGETVVVNWVR--HCLYDATGDDWK----TLGLIQQLGPKIFTFVEQNMCH-GGSYLDRFVSSLHYYSAIFDSLGACLSSNDSN 420
                     *********************9..889988888888....********************99.779***************************** PP

            GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
                     r+ vE+ +l rei n++a  g++r   +e++++Wr+ l+++ + +vp+s++  +qa l+l++ + ++g+++ + +g ++ l Wkd +L+++S+W+
  XP_023004772.1 421 RNQVEHNILYREINNILAIGGSSR-SGEEKFKEWRSELRKC-LMEVPMSSNSIAQAWLMLNMQSnNQGFTLVQGEGGALnLRWKDTSLYTASSWT 513
                     **********************95.56788*********99.678*******************9*****9988777777**************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 520 aa     Download sequence    
MAWFLPAIFL RSDHKIKKKQ KMQKTKLLCL PLKWLPCPFI TNLSHPYIFF LSPYPQSFAF  60
PMKLSRPEVD NGCLLQPPDP DEPWDFELPS SSISNTPIFH NQAFNLQSSN EFAYSVDHVN  120
DLLESSTDDT TNGDELQVHV GNGRSKDVDD HGLTLISLLF ECSVAISVDN LVEAHRMLLE  180
LTQMASPYGQ SSAERVVTYF AAAMSSRVIN SILGICSPLL DYKSISNSFQ IFNNVSPLLK  240
FAHLASNQTI LESLSQCVDP IHIIDLDIMQ GIQWPPLFQA LTTKMDDSRS RHVRITAMGT  300
TMELLLDTGK QLSNIARQLG ISFEYNPIAT KVGKVDISMV KLRQGETVVV NWVRHCLYDA  360
TGDDWKTLGL IQQLGPKIFT FVEQNMCHGG SYLDRFVSSL HYYSAIFDSL GACLSSNDSN  420
RNQVEHNILY REINNILAIG GSSRSGEEKF KEWRSELRKC LMEVPMSSNS IAQAWLMLNM  480
QSNNQGFTLV QGEGGALNLR WKDTSLYTAS SWTRCNVGVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.11e-115GRAS family protein