PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023004748.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | FAR1 | ||||||||
Protein Properties | Length: 249aa MW: 28223.1 Da PI: 7.4428 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 79.3 | 7.1e-25 | 83 | 172 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 kfY eYA+++GF vr+ + + s +g++ +++ C+k+g++ +++ + +++r+++r gCka++ vk+ek+gkw v++++++HnH+l+ XP_023004748.1 83 KFYVEYARQMGFVVRIMQRRCSGIDGRTLAQRLGCNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIVSRIVKDHNHPLV 172 6******************************************99999****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MPSHPLIVSI SEGEEISVIL PSFCSFHLRF GCKALSTDSG FRFNDETGRA HDSIEINGDA 60 AEGNLILEPY VGMEFDSEDA ARKFYVEYAR QMGFVVRIMQ RRCSGIDGRT LAQRLGCNKQ 120 GFSPNRRGIY GSDKKPRPSS REGCKATILV KMEKSGKWIV SRIVKDHNHP LVVCSNGFSC 180 SGDKDKKIEE LKMELEHQEQ QCVAYREKLF DFISTVEEQT EELSSKIQMI IGNVRQVESG 240 TQKHYPFRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12850.1 | 3e-65 | FAR1 family protein |