PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023004442.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 1033aa MW: 114577 Da PI: 9.9085

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023004442.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	17.4	7.4e-06	69	125	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ ++++F + +s++e +e+++ g++ +qV+ +F +R + +k XP_023004442.1 69 KRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVAQVRDFFNSQRSRVRK 125 799**************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1033 aa Download sequence
MEVVKDDFSN LEIGTSVESF QKFLDSQNDL FRSQVDQLQR VVVTQCKLTG ANPLSQEMAA 60 GALSITIGKR PRDLLNPKAV KYMQTVFSIK DALSKKESRE ISALFGVKVA QVRDFFNSQR 120 SRVRKLVRLS RERSVKSNSC KQLEVGGIAM NNDPSMPIDA VPLNSDALVP LNSDAPIPLN 180 SEAPVPLNFA TPVPLNTIEP SNVDSGPSCS TQDSKLSDID GIDKHFVQTI FSMMQKEETF 240 SGQVKLMEWI LQIQNSSVLC WFLTKDGAII LATWLSQAAA EEQTSLLHVI LEVFCHLPLH 300 KALPMHISAI LQSVNNLRFY RTSDISNRAR FLISRWSKLL IRSQALKKPN GMKLLTNSQT 360 DMILKQSIGG ITSDESWKSN VDVPENFGNP SVNVDNMRKS GTHQAFKLLP ASSDDLNRKN 420 VLGLSSSRFR ERRKVQMVEQ PEQKVAGRNL QAPRTPASQG RPMSTDDIQK AKIRAQFMQS 480 KYGKTGLSNG RMHTKSGNVN KPLHSSASSP ASKISLRPKF EDQKRAVVLL PKNSNKVETP 540 LHSKIEVEFK DSLGEKCKRV QIQWRMPPEM KFNDLWRVGG GDNSKEAGFQ KNRNSREKET 600 FYKTILEIPP NPKEPWDLEM DYDDSLTPEI LTEQLPDNES SEPEIRNSAV DGAVPSEVIS 660 SQDLKPNAAA DEPDLELLAV LLKNPELVYA LTSSQAGNFP ARETVKLLDM IKAGVANGVN 720 GMEKTLEVSL PSPTPSSDAG TSGWKPAVFK NPFSQRDSIA ESRVALPSPP VDTSSIAVSR 780 MPPVSQQPPA SVSQFSLPQT TINRLQPDHV VHSHQYQRQQ GVLNPNVRLP NSEVALASRS 840 FPIAKLPLVN QSTAAASSVR IVGGNDAKPI SFASNTLERV PISFQSPPSP TPTRMPPIQK 900 QRQQPQLQPY RSEHPHQTRV NISSSSAEKS APGLCSWRPR LQDIGSHYNS GGNHNKESKY 960 VGGPMAGRGG PSWGRNEFES WSPENSPVRT QEYSRADRSY GAAEQQRQSS SPYGYGEQNR 1020 HGNNSRRWHD RQY

Sequence ? help Back to Top

Protein Sequence Length: 1033 aa Download sequence

MEVVKDDFSN LEIGTSVESF QKFLDSQNDL FRSQVDQLQR VVVTQCKLTG ANPLSQEMAA  60
GALSITIGKR PRDLLNPKAV KYMQTVFSIK DALSKKESRE ISALFGVKVA QVRDFFNSQR  120
SRVRKLVRLS RERSVKSNSC KQLEVGGIAM NNDPSMPIDA VPLNSDALVP LNSDAPIPLN  180
SEAPVPLNFA TPVPLNTIEP SNVDSGPSCS TQDSKLSDID GIDKHFVQTI FSMMQKEETF  240
SGQVKLMEWI LQIQNSSVLC WFLTKDGAII LATWLSQAAA EEQTSLLHVI LEVFCHLPLH  300
KALPMHISAI LQSVNNLRFY RTSDISNRAR FLISRWSKLL IRSQALKKPN GMKLLTNSQT  360
DMILKQSIGG ITSDESWKSN VDVPENFGNP SVNVDNMRKS GTHQAFKLLP ASSDDLNRKN  420
VLGLSSSRFR ERRKVQMVEQ PEQKVAGRNL QAPRTPASQG RPMSTDDIQK AKIRAQFMQS  480
KYGKTGLSNG RMHTKSGNVN KPLHSSASSP ASKISLRPKF EDQKRAVVLL PKNSNKVETP  540
LHSKIEVEFK DSLGEKCKRV QIQWRMPPEM KFNDLWRVGG GDNSKEAGFQ KNRNSREKET  600
FYKTILEIPP NPKEPWDLEM DYDDSLTPEI LTEQLPDNES SEPEIRNSAV DGAVPSEVIS  660
SQDLKPNAAA DEPDLELLAV LLKNPELVYA LTSSQAGNFP ARETVKLLDM IKAGVANGVN  720
GMEKTLEVSL PSPTPSSDAG TSGWKPAVFK NPFSQRDSIA ESRVALPSPP VDTSSIAVSR  780
MPPVSQQPPA SVSQFSLPQT TINRLQPDHV VHSHQYQRQQ GVLNPNVRLP NSEVALASRS  840
FPIAKLPLVN QSTAAASSVR IVGGNDAKPI SFASNTLERV PISFQSPPSP TPTRMPPIQK  900
QRQQPQLQPY RSEHPHQTRV NISSSSAEKS APGLCSWRPR LQDIGSHYNS GGNHNKESKY  960
VGGPMAGRGG PSWGRNEFES WSPENSPVRT QEYSRADRSY GAAEQQRQSS SPYGYGEQNR  1020
HGNNSRRWHD RQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	1e-147	HB-other family protein