PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023004171.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 452aa    MW: 51934 Da    PI: 5.8228
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023004171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS313.64.5e-96644513374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL ecA+a+s++d +++++lL+ l+elasp+gd+ q+la yf++AL  ++++++ ++yk+l + ++++++ +++l+    f+evsP+++f+h++
  XP_023004171.1  64 TLLNECARAISDKDSNKIHHLLWMLNELASPYGDSDQKLAYYFLQALFCKVTETGLTCYKTLITVAEKNYSFDSALKLILKFQEVSPWMTFGHVA 158
                     689***********************************************************9999998888888888888************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledlel 191
                      N aIlea+e+e+++HiiD++ + ++QWp+Ll++La+R++++p+l++T+v+  +++ k  ++e+g+r++kfA+ +gvpfefn++   ++l+dle 
  XP_023004171.1 159 SNGAILEALERETKLHIIDISDTLCTQWPTLLESLATRNDDTPHLKLTVVST-TTKVKSLMKEIGQRMEKFARLMGVPFEFNPItNLNQLSDLEN 252
                     ****************************************************.6678999***********************95556******* PP

            GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseerik 284
                     e+L+v+++Ea+a+n+  +l ++      +e+ r++v++++ksl+P+v+++ve+ead   ++++Fl  f e+l++y+  f +le+ + ++s+e+  
  XP_023004171.1 253 EALKVEEDEAIAINCNGALRTVK-----IEE-RNAVISMLKSLKPRVLTIVEEEADFisSKNKFLSYFDECLRFYTLYFKMLEECFEATSNEKLG 341
                     *****************999997.....666.89**********************9867889******************************** PP

            GRAS 285 vErellgreivnvvacegae...r...rerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdg.yrve........ee.....sgsl 358
                     +Ere  +r+iv ++ c +++   r    er+e+ ++W++rlee GF+++++s+++++++k+ll+++k ++  +++         ee     s+ +
  XP_023004171.1 342 LERE-CSRNIVRLLGCGNESeleReltSERREKGKQWSKRLEERGFSSARFSDDVMDDVKALLKRYKpGWSlMHWTgatdtnrdEEeggddSNGI 435
                     ****.89********9766422232226899************************************533335555777666651156665999* PP

            GRAS 359 vlgWkdrpLvsvSaWr 374
                     +l+Wk++p+v++SaW+
  XP_023004171.1 436 YLTWKEEPVVWISAWK 451
                     ***************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    
MDITLFTAKE SPTTFFSQSH DHRHRHRLHR LRFPNLAMQS STSQSSEYSL DHSLPATVGK  60
WASTLLNECA RAISDKDSNK IHHLLWMLNE LASPYGDSDQ KLAYYFLQAL FCKVTETGLT  120
CYKTLITVAE KNYSFDSALK LILKFQEVSP WMTFGHVASN GAILEALERE TKLHIIDISD  180
TLCTQWPTLL ESLATRNDDT PHLKLTVVST TTKVKSLMKE IGQRMEKFAR LMGVPFEFNP  240
ITNLNQLSDL ENEALKVEED EAIAINCNGA LRTVKIEERN AVISMLKSLK PRVLTIVEEE  300
ADFISSKNKF LSYFDECLRF YTLYFKMLEE CFEATSNEKL GLERECSRNI VRLLGCGNES  360
ELERELTSER REKGKQWSKR LEERGFSSAR FSDDVMDDVK ALLKRYKPGW SLMHWTGATD  420
TNRDEEEGGD DSNGIYLTWK EEPVVWISAW KP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-133GRAS family protein