PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023004055.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | YABBY | ||||||||
Protein Properties | Length: 191aa MW: 21517.4 Da PI: 7.3113 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 208.7 | 2.1e-64 | 7 | 165 | 5 | 170 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 ++eq+Cy+ CnfCn +lavsvP +slf +vtvrCGhCt+l svn+a a q l+ ++ + + + + +++ + s+s+ +++ XP_023004055.1 7 IAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDV-Q-------VPNYNLYTSSGPDFQGDFGSSSKCDNNN 93 689**********************************************999999985.2.......2222222222222233333333333333 PP YABBY 100 klsenedeevp.rvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 k++ ++ ++ + v+rPPekrqrvPsayn+fikeeiqrika+nP+ishreafs+aaknWahfP+ihfgl XP_023004055.1 94 KMQIRDSTTIAaEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKAKNPEISHREAFSTAAKNWAHFPRIHFGL 165 333333333330334599****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MSSCIDIAPE QLCYIPCNFC NIVLAVSVPC SSLFDIVTVR CGHCTNLWSV NMAAAFQSLS 60 WQDVQVPNYN LYTSSGPDFQ GDFGSSSKCD NNNKMQIRDS TTIAAEERVV NRPPEKRQRV 120 PSAYNQFIKE EIQRIKAKNP EISHREAFST AAKNWAHFPR IHFGLMFETN NQAKIDDGSE 180 RLMSMAALLN K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 2e-86 | YABBY family protein |