PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023004048.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 141aa MW: 15966.2 Da PI: 5.3547

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023004048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.2	1.7e-41	56	132	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cq+++C++dl+ a+ yhrrhkvCe+hska+vv+++gleqrfCqqCsrfh++sefDe+krsCrrrLa+hnerrrk+ XP_023004048.1 56 RCQADSCNVDLNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCRRRLAGHNERRRKNL 132 6*************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence
MENSGDQGWG DPVEEEEEEE EEDDDDEVGF VEDERKKRAV SSSRSGSGGG RTSVARCQAD 60 SCNVDLNGAR AYHRRHKVCE FHSKAAVVIL AGLEQRFCQQ CSRFHSVSEF DETKRSCRRR 120 LAGHNERRRK NLPDFQGQSS T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33810.1	9e-38	SBP family protein