PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023003921.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WOX
Protein Properties Length: 291aa    MW: 32397.6 Da    PI: 7.6987
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023003921.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.75.5e-202788257
                    T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    ++R+t+t++q+++L+el+++   r psa+++++++++l    +++ ++V++WFqN++a+e++
  XP_023003921.1 27 STRWTPTTDQIRILKELYYNngVRSPSADQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 88
                    58****************98678*************************************97 PP
2Wus_type_Homeobox114.55.4e-372690265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ++tRWtPt++Qi+iL+ely+ +G+r+P++++iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
     XP_023003921.1 26 SSTRWTPTTDQIRILKELYYnNGVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 90
                       789***************9779*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MDHQKAAAQG NEEGSNGKGG FVCRQSSTRW TPTTDQIRIL KELYYNNGVR SPSADQIQRI  60
SARLRQYGKI EGKNVFYWFQ NHKARERQKK RFTSSASDHH HHHQQIPVPK QQQQQQLQSS  120
LVSSKPEDSS SSPLFHTKCP PTPSSSVMVA VGHMGNYGYG STTFENSFRE CSISSGGSSS  180
MVGSRRSHHM GSWIGVDPYS SPASAAATVF EKTKYVEESM EEEEQEIETL PLFPIHDDRS  240
LGGFCSMKPK YSDGYYTTTW YGRSDDGATG SRTSLELSLN SYAAISPDDA I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.17e-42WOX family protein