PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003780.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 1698aa MW: 192616 Da PI: 4.6837

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003780.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.9	2e-19	30	86	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r kR+ t+ qle+Le++F+ + yps+++r+eL++klgLt+rq ++WF+ rR k+kk XP_023003780.1 30 RPKRQMKTPFQLETLEKAFALETYPSESTRAELSEKLGLTDRQLQMWFCHRRLKDKK 86 579****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1698 aa Download sequence
MEAAASDGGN HNLNNDNINK ISNSSEGLSR PKRQMKTPFQ LETLEKAFAL ETYPSESTRA 60 ELSEKLGLTD RQLQMWFCHR RLKDKKEPAK KPRNVVPAFP DSPIDELRVV AEPGSDYASG 120 SGSGSSPFGD VGLRNVASGS GGDDMLMTRR YYEPSRSIME LRAIACVESQ LGEPLREDGP 180 IIGIEFDSLP PDAFGAPLVA EQQKRSGHLY GDKYDQRDAK SNKATARAFP EYPFMPDQSR 240 IRADAYGPVA QSHYPDSLVE EQQGIAVPSP ADDNTFVPAS IRNPIVVQED SYMLPDGQVF 300 PNDVIIRMER KRKSEEARLN KEAEAHEIRM RKELEKQDNL RKKSEERIRK EMEKQDRERR 360 KEEERLQREK QREVERLKRE ERRELERREK FLQREYLKAE KRRQKEAIRK EKEAVRRKAA 420 IEKATARRIA RESMELIEDE QLELMEIAAA NKGLSSILSL DHDTLQNLES FRDYLGAFPP 480 KSVQLKKPFS IQPWINSEEN IGNLLMVWRF FITFSDVLEL WPFTLDEFVQ ALHDYDSRLL 540 GEIHICLLRL IVKDIEDVAR TPSAGLGMNQ NGVANTGGGH PQIVEGAYAW GFDICNWQKH 600 LNPLTWPEIF RQLALSAGFG PQLKRSLAWS EMRSNDEAKC GEDVVSTLRN GSAAENAFSI 660 MQEKGLLAPR RSRHRLTPGT VKFAAFHVLS LEGSEGLTVL ELAEKIQRSG LRDLSTSRTP 720 EASISVALTR DTKLFERIAP STYRVRSPYR KDPDDAEDLL SVARKKIQVF QNGFLAGEDA 780 DDVERDEESE CDDVDEDPEV DDVAMTSLVN EDVSKGDANL GVENENSCHD IDGNPQNEIA 840 KNIPSSPLSG SKDTKYLNIP TEQQAAVDGT TVTDLDQENM EIDESKEGES WIQGLTEGEY 900 HDLSVEERLN ALIALTSIAN EGNSIRLVLE DRLEAANAVK KQMLAEAQID KSRLKEEIIT 960 KSDFPIHIVS KVETELNGSA MEDGQSPFPV ADSQNNETTL CNAENLGSVP NERATLVPDF 1020 FPVPDNFLAQ QCGHASKRSR SQLKSYIAQR AEEMYTYRSL PLGRDRRRNR YWQFVASSSS 1080 NDPGSGRIFV EMYDGKWMLI DSEEGFDALS MALDTRGVRE SHLRIMLQMI ETSFKENVRR 1140 NLQCVNVMVQ SRITPKNEND ESSSSPDCNA SFNSPSSTVC GLNLDTTITS SSFRIELGRN 1200 ENEKKAAFKR YQDLHRWMLR ECFSTSTLCA MEFGEKRCMP LLDICDSCLC LFDSQHSHCS 1260 SCHQTYGTSE NDTNFLEHEC HCTRERKSYN WDTHALDASL PLKSRLLKAL LAFIEVHVPS 1320 EAFQLFWTEH RKDWGVRMKL SSTIEELLQI LTLFESVIKR DFLKSDFTTT DEHLSSCSIS 1380 RNVIHDAADV GSVLTLPWIP RTSAAVALRL CEIDVSIYYI GCEKPEPDQY KEIGEHVNFP 1440 SRFVQIKNEN ELDYDGLMKQ ENLADPKNLR NSYKRDRRSR DHGRRKRWQK KVNGSKSSRV 1500 RPNVKSNEKM NEEQRELGQG MQVLGVRGPR TVRKRRAENS IPDEGLLGLV PSSSTRNIDE 1560 SPKDYIGKWE DEKMDRFVDM EDDENVMEDE ENEEDEENVN NVEPMDSDED AQEVGYEQGS 1620 WEYGIDNGTS NRWNGDLGVA SDEEDVELSE DYNGTEEGGN DFGEEELDDD TSVESDCSPN 1680 RIGNNGGRES PVSDDYSD

Sequence ? help Back to Top

Protein Sequence Length: 1698 aa Download sequence

MEAAASDGGN HNLNNDNINK ISNSSEGLSR PKRQMKTPFQ LETLEKAFAL ETYPSESTRA  60
ELSEKLGLTD RQLQMWFCHR RLKDKKEPAK KPRNVVPAFP DSPIDELRVV AEPGSDYASG  120
SGSGSSPFGD VGLRNVASGS GGDDMLMTRR YYEPSRSIME LRAIACVESQ LGEPLREDGP  180
IIGIEFDSLP PDAFGAPLVA EQQKRSGHLY GDKYDQRDAK SNKATARAFP EYPFMPDQSR  240
IRADAYGPVA QSHYPDSLVE EQQGIAVPSP ADDNTFVPAS IRNPIVVQED SYMLPDGQVF  300
PNDVIIRMER KRKSEEARLN KEAEAHEIRM RKELEKQDNL RKKSEERIRK EMEKQDRERR  360
KEEERLQREK QREVERLKRE ERRELERREK FLQREYLKAE KRRQKEAIRK EKEAVRRKAA  420
IEKATARRIA RESMELIEDE QLELMEIAAA NKGLSSILSL DHDTLQNLES FRDYLGAFPP  480
KSVQLKKPFS IQPWINSEEN IGNLLMVWRF FITFSDVLEL WPFTLDEFVQ ALHDYDSRLL  540
GEIHICLLRL IVKDIEDVAR TPSAGLGMNQ NGVANTGGGH PQIVEGAYAW GFDICNWQKH  600
LNPLTWPEIF RQLALSAGFG PQLKRSLAWS EMRSNDEAKC GEDVVSTLRN GSAAENAFSI  660
MQEKGLLAPR RSRHRLTPGT VKFAAFHVLS LEGSEGLTVL ELAEKIQRSG LRDLSTSRTP  720
EASISVALTR DTKLFERIAP STYRVRSPYR KDPDDAEDLL SVARKKIQVF QNGFLAGEDA  780
DDVERDEESE CDDVDEDPEV DDVAMTSLVN EDVSKGDANL GVENENSCHD IDGNPQNEIA  840
KNIPSSPLSG SKDTKYLNIP TEQQAAVDGT TVTDLDQENM EIDESKEGES WIQGLTEGEY  900
HDLSVEERLN ALIALTSIAN EGNSIRLVLE DRLEAANAVK KQMLAEAQID KSRLKEEIIT  960
KSDFPIHIVS KVETELNGSA MEDGQSPFPV ADSQNNETTL CNAENLGSVP NERATLVPDF  1020
FPVPDNFLAQ QCGHASKRSR SQLKSYIAQR AEEMYTYRSL PLGRDRRRNR YWQFVASSSS  1080
NDPGSGRIFV EMYDGKWMLI DSEEGFDALS MALDTRGVRE SHLRIMLQMI ETSFKENVRR  1140
NLQCVNVMVQ SRITPKNEND ESSSSPDCNA SFNSPSSTVC GLNLDTTITS SSFRIELGRN  1200
ENEKKAAFKR YQDLHRWMLR ECFSTSTLCA MEFGEKRCMP LLDICDSCLC LFDSQHSHCS  1260
SCHQTYGTSE NDTNFLEHEC HCTRERKSYN WDTHALDASL PLKSRLLKAL LAFIEVHVPS  1320
EAFQLFWTEH RKDWGVRMKL SSTIEELLQI LTLFESVIKR DFLKSDFTTT DEHLSSCSIS  1380
RNVIHDAADV GSVLTLPWIP RTSAAVALRL CEIDVSIYYI GCEKPEPDQY KEIGEHVNFP  1440
SRFVQIKNEN ELDYDGLMKQ ENLADPKNLR NSYKRDRRSR DHGRRKRWQK KVNGSKSSRV  1500
RPNVKSNEKM NEEQRELGQG MQVLGVRGPR TVRKRRAENS IPDEGLLGLV PSSSTRNIDE  1560
SPKDYIGKWE DEKMDRFVDM EDDENVMEDE ENEEDEENVN NVEPMDSDED AQEVGYEQGS  1620
WEYGIDNGTS NRWNGDLGVA SDEEDVELSE DYNGTEEGGN DFGEEELDDD TSVESDCSPN  1680
RIGNNGGRES PVSDDYSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	87	RRLKDKKE
2	397	403	LKAEKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein