PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003779.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 1733aa MW: 196618 Da PI: 4.7449

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003779.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.8	2.1e-19	30	86	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r kR+ t+ qle+Le++F+ + yps+++r+eL++klgLt+rq ++WF+ rR k+kk XP_023003779.1 30 RPKRQMKTPFQLETLEKAFALETYPSESTRAELSEKLGLTDRQLQMWFCHRRLKDKK 86 579****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1733 aa Download sequence
MEAAASDGGN HNLNNDNINK ISNSSEGLSR PKRQMKTPFQ LETLEKAFAL ETYPSESTRA 60 ELSEKLGLTD RQLQMWFCHR RLKDKKEPAK KPRNVVPAFP DSPIDELRVV AEPGSDYASG 120 SGSGSSPFGD VGLRNVASGS GGDDMLMTRR YYEPSRSIME LRAIACVESQ LGEPLREDGP 180 IIGIEFDSLP PDAFGAPLVA EQQKRSGHLY GDKYDQRDAK SNKATARAFP EYPFMPDQSR 240 IRADAYGPVA QSHYPDSLVE VSAARNPSFL LGREQLNRSH NYHGQVSRVR LLSQQEQQGI 300 AVPSPADDNT FVPASIRNPI VVQEDSYMLP DGQVFPNDVI IRMERKRKSE EARLNKEAEA 360 HEIRMRKELE KQDNLRKKSE ERIRKEMEKQ DRERRKEEER LQREKQREVE RLKREERREL 420 ERREKFLQRE YLKAEKRRQK EAIRKEKEAV RRKAAIEKAT ARRIARESME LIEDEQLELM 480 EIAAANKGLS SILSLDHDTL QNLESFRDYL GAFPPKSVQL KKPFSIQPWI NSEENIGNLL 540 MVWRFFITFS DVLELWPFTL DEFVQALHDY DSRLLGEIHI CLLRLIVKDI EDVARTPSAG 600 LGMNQNGVAN TGGGHPQIVE GAYAWGFDIC NWQKHLNPLT WPEIFRQLAL SAGFGPQLKR 660 SLAWSEMRSN DEAKCGEDVV STLRNGSAAE NAFSIMQEKG LLAPRRSRHR LTPGTVKFAA 720 FHVLSLEGSE GLTVLELAEK IQRSGLRDLS TSRTPEASIS VALTRDTKLF ERIAPSTYRV 780 RSPYRKDPDD AEDLLSVARK KIQVFQNGFL AGEDADDVER DEESECDDVD EDPEVDDVAM 840 TSLVNEDVSK GDANLGVENE NSCHDIDGNP QNEIAKNIPS SPLSGSKDTK YLNIPTEQQA 900 AVDGTTVTDL DQENMEIDES KEGESWIQGL TEGEYHDLSV EERLNALIAL TSIANEGNSI 960 RLVLEDRLEA ANAVKKQMLA EAQIDKSRLK EEIITKSDFP IHIVSKVETE LNGSAMEDGQ 1020 SPFPVADSQN NETTLCNAEN LGSVPNERAT LVPDFFPVPD NFLAQQCGHA SKRSRSQLKS 1080 YIAQRAEEMY TYRSLPLGRD RRRNRYWQFV ASSSSNDPGS GRIFVEMYDG KWMLIDSEEG 1140 FDALSMALDT RGVRESHLRI MLQMIETSFK ENVRRNLQCV NVMVQSRITP KNENDESSSS 1200 PDCNASFNSP SSTVCGLNLD TTITSSSFRI ELGRNENEKK AAFKRYQDLH RWMLRECFST 1260 STLCAMEFGE KRCMPLLDIC DSCLCLFDSQ HSHCSSCHQT YGTSENDTNF LEHECHCTRE 1320 RKSYNWDTHA LDASLPLKSR LLKALLAFIE VHVPSEAFQL FWTEHRKDWG VRMKLSSTIE 1380 ELLQILTLFE SVIKRDFLKS DFTTTDEHLS SCSISRNVIH DAADVGSVLT LPWIPRTSAA 1440 VALRLCEIDV SIYYIGCEKP EPDQYKEIGE HVNFPSRFVQ IKNENELDYD GLMKQENLAD 1500 PKNLRNSYKR DRRSRDHGRR KRWQKKVNGS KSSRVRPNVK SNEKMNEEQR ELGQGMQVLG 1560 VRGPRTVRKR RAENSIPDEG LLGLVPSSST RNIDESPKDY IGKWEDEKMD RFVDMEDDEN 1620 VMEDEENEED EENVNNVEPM DSDEDAQEVG YEQGSWEYGI DNGTSNRWNG DLGVASDEED 1680 VELSEDYNGT EEGGNDFGEE ELDDDTSVES DCSPNRIGNN GGRESPVSDD YSD

Sequence ? help Back to Top

Protein Sequence Length: 1733 aa Download sequence

MEAAASDGGN HNLNNDNINK ISNSSEGLSR PKRQMKTPFQ LETLEKAFAL ETYPSESTRA  60
ELSEKLGLTD RQLQMWFCHR RLKDKKEPAK KPRNVVPAFP DSPIDELRVV AEPGSDYASG  120
SGSGSSPFGD VGLRNVASGS GGDDMLMTRR YYEPSRSIME LRAIACVESQ LGEPLREDGP  180
IIGIEFDSLP PDAFGAPLVA EQQKRSGHLY GDKYDQRDAK SNKATARAFP EYPFMPDQSR  240
IRADAYGPVA QSHYPDSLVE VSAARNPSFL LGREQLNRSH NYHGQVSRVR LLSQQEQQGI  300
AVPSPADDNT FVPASIRNPI VVQEDSYMLP DGQVFPNDVI IRMERKRKSE EARLNKEAEA  360
HEIRMRKELE KQDNLRKKSE ERIRKEMEKQ DRERRKEEER LQREKQREVE RLKREERREL  420
ERREKFLQRE YLKAEKRRQK EAIRKEKEAV RRKAAIEKAT ARRIARESME LIEDEQLELM  480
EIAAANKGLS SILSLDHDTL QNLESFRDYL GAFPPKSVQL KKPFSIQPWI NSEENIGNLL  540
MVWRFFITFS DVLELWPFTL DEFVQALHDY DSRLLGEIHI CLLRLIVKDI EDVARTPSAG  600
LGMNQNGVAN TGGGHPQIVE GAYAWGFDIC NWQKHLNPLT WPEIFRQLAL SAGFGPQLKR  660
SLAWSEMRSN DEAKCGEDVV STLRNGSAAE NAFSIMQEKG LLAPRRSRHR LTPGTVKFAA  720
FHVLSLEGSE GLTVLELAEK IQRSGLRDLS TSRTPEASIS VALTRDTKLF ERIAPSTYRV  780
RSPYRKDPDD AEDLLSVARK KIQVFQNGFL AGEDADDVER DEESECDDVD EDPEVDDVAM  840
TSLVNEDVSK GDANLGVENE NSCHDIDGNP QNEIAKNIPS SPLSGSKDTK YLNIPTEQQA  900
AVDGTTVTDL DQENMEIDES KEGESWIQGL TEGEYHDLSV EERLNALIAL TSIANEGNSI  960
RLVLEDRLEA ANAVKKQMLA EAQIDKSRLK EEIITKSDFP IHIVSKVETE LNGSAMEDGQ  1020
SPFPVADSQN NETTLCNAEN LGSVPNERAT LVPDFFPVPD NFLAQQCGHA SKRSRSQLKS  1080
YIAQRAEEMY TYRSLPLGRD RRRNRYWQFV ASSSSNDPGS GRIFVEMYDG KWMLIDSEEG  1140
FDALSMALDT RGVRESHLRI MLQMIETSFK ENVRRNLQCV NVMVQSRITP KNENDESSSS  1200
PDCNASFNSP SSTVCGLNLD TTITSSSFRI ELGRNENEKK AAFKRYQDLH RWMLRECFST  1260
STLCAMEFGE KRCMPLLDIC DSCLCLFDSQ HSHCSSCHQT YGTSENDTNF LEHECHCTRE  1320
RKSYNWDTHA LDASLPLKSR LLKALLAFIE VHVPSEAFQL FWTEHRKDWG VRMKLSSTIE  1380
ELLQILTLFE SVIKRDFLKS DFTTTDEHLS SCSISRNVIH DAADVGSVLT LPWIPRTSAA  1440
VALRLCEIDV SIYYIGCEKP EPDQYKEIGE HVNFPSRFVQ IKNENELDYD GLMKQENLAD  1500
PKNLRNSYKR DRRSRDHGRR KRWQKKVNGS KSSRVRPNVK SNEKMNEEQR ELGQGMQVLG  1560
VRGPRTVRKR RAENSIPDEG LLGLVPSSST RNIDESPKDY IGKWEDEKMD RFVDMEDDEN  1620
VMEDEENEED EENVNNVEPM DSDEDAQEVG YEQGSWEYGI DNGTSNRWNG DLGVASDEED  1680
VELSEDYNGT EEGGNDFGEE ELDDDTSVES DCSPNRIGNN GGRESPVSDD YSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	87	RRLKDKKE
2	432	438	LKAEKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein