PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023003296.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | Trihelix | ||||||||
Protein Properties | Length: 298aa MW: 33575.4 Da PI: 5.1316 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 54.1 | 4.2e-17 | 24 | 114 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++ + +Li++ ++ +l+rg+l++++W++v++++ ++++ +r+ +qCk++++ ++k+yk++k++ + + +s++p++d+l+ XP_023003296.1 24 CWSQEATSTLIDFWGRRFVELNRGNLRQKDWQDVAEAVnalhgHSKKTHRTDVQCKNRIDTIKKKYKNEKARVSASNGSLTSSWPFYDRLD 114 7******************************************9***************************999887777789******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence |
MGDLTDSLTP SSGHSRPIPV REDCWSQEAT STLIDFWGRR FVELNRGNLR QKDWQDVAEA 60 VNALHGHSKK THRTDVQCKN RIDTIKKKYK NEKARVSASN GSLTSSWPFY DRLDVLIGSN 120 VSLKKPSTSM SPSPPMVRPL SYRKAPPSGT ANAVSVAIPQ KRPLAVVDGG HFRRNYSAMA 180 AAAAATEAEE EEEEEEEEEE EEEAEADAEE RGIEEEEEGE GGGMRRLAEA IERFGKMYER 240 VEAEKLRQMV ELEKQRMQFA KDLEVQRMQM FTETQVQLER IKRGKKSGSN VLDASNSV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58630.1 | 8e-41 | Trihelix family protein |