PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023002965.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 496aa MW: 52816.7 Da PI: 9.1243

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023002965.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_023002965.1 61 FVCEICNKGFQRDQNLQLHRRGH 83 89*******************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MPVDLDSSSP ASGEPTVSTP GNPASPPNSA VRKKRNLPGM PDPEAEVIAL SPKTLLATNR 60 FVCEICNKGF QRDQNLQLHR RGHNLPWKLR RRSSKEVKKK VYVCPESSCV HHDPSRALGD 120 LTGIKKHFCR KHGEKKWKCG KCSKKYGVQS DWKAHSKICG THEYKCDCGT LFNRRDSFIT 180 HRAFCDVLAE ERAKALLKPV GNSQTAVGKP NPEPSPPSPP PPSPLQSACE PTTVLAVPSQ 240 ELPENPLQCI EEAAGMSGTS RSSSSSSSSS SNGSTRSSRF AGLFASSTTS MSLQPPRPYR 300 DLMQAMACSD RSPDYASSST IEPISLCLAM NQGPSMFGTA SQYHRPYLPM PHPAMSATAL 360 LQKAAQVGAA ASNASLLRGL GLVSSSSAAA QQEILAWNHQ RRVEPDDVSF AAGLGLGLPC 420 DGNSGLKQLT RGNHSMFAPK HTTLDFLGLG MAAGGSPNSG LAALITSIGG SVDVTTTTTR 480 SYGATDISTI DMNTNN

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MPVDLDSSSP ASGEPTVSTP GNPASPPNSA VRKKRNLPGM PDPEAEVIAL SPKTLLATNR  60
FVCEICNKGF QRDQNLQLHR RGHNLPWKLR RRSSKEVKKK VYVCPESSCV HHDPSRALGD  120
LTGIKKHFCR KHGEKKWKCG KCSKKYGVQS DWKAHSKICG THEYKCDCGT LFNRRDSFIT  180
HRAFCDVLAE ERAKALLKPV GNSQTAVGKP NPEPSPPSPP PPSPLQSACE PTTVLAVPSQ  240
ELPENPLQCI EEAAGMSGTS RSSSSSSSSS SNGSTRSSRF AGLFASSTTS MSLQPPRPYR  300
DLMQAMACSD RSPDYASSST IEPISLCLAM NQGPSMFGTA SQYHRPYLPM PHPAMSATAL  360
LQKAAQVGAA ASNASLLRGL GLVSSSSAAA QQEILAWNHQ RRVEPDDVSF AAGLGLGLPC  420
DGNSGLKQLT RGNHSMFAPK HTTLDFLGLG MAAGGSPNSG LAALITSIGG SVDVTTTTTR  480
SYGATDISTI DMNTNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-106	C2H2 family protein