PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023002694.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | Nin-like | ||||||||
Protein Properties | Length: 372aa MW: 42247.3 Da PI: 4.5959 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 70.5 | 2.4e-22 | 279 | 327 | 3 | 51 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 +++++d+ +y +lpi +A+k+L+vc TvLK+iCR+ G++RWP+Rki+s XP_023002694.1 279 GRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRS 327 678999*****************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 372 aa Download sequence |
MAIDPRNTMG AFEPDQDPYD SSINANILNF ANDQNPTLDD LQSTAEQPVA AARDSYGGRT 60 SAFQNMGMVE LLTHFSFGGQ YDSEAGPSNA GEAASNFEED DDTQIPSEVE SKLLAIWPVT 120 PVPFLCSCCQ VLREFLHSNG VNSRKLEIHG RLGMICHAIL EHKPIVNVDN ISPQYQMFDF 180 CDKSFEEIKQ FLLQYCLKQI LEDYNMIPDP MSNFYDALCV GIDWFENLNT TDAFFQQSPD 240 NSEDEDIDQP VPEFQNDAPE PQGQPSRRPS LAAQRQRTGR MTVNDVWEYL HLPISEASKK 300 LNVCNTVLKK ICRRSGLSRW PYRKIRSYER RIAALKTTMN SNYGDTKARA RAEAEIQRVQ 360 KELSDFCARI RI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64530.1 | 1e-12 | Nin-like family protein |