PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023002679.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 378aa MW: 43354.6 Da PI: 6.6363

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023002679.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	86.8	2.6e-27	69	150	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li +rr m+ ++++k++k+lWe++s+kmrergf rsp++C++kw+nl k++kk k+++++ s +++y++++e XP_023002679.1 69 WVQDETRSLISLRRGMDGLFNTSKSNKHLWEQISAKMRERGFDRSPTMCTDKWRNLLKEFKKAKHHDRGS---GSAKMSYYKEIE 150 ******************************************************************84...556899*997 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MYLSDKPRPI DIYKEEGSRD MMIEVASNGD HHIQPHQPQQ THQQHQMMLG DSSGEDHEVK 60 APKKRAETWV QDETRSLISL RRGMDGLFNT SKSNKHLWEQ ISAKMRERGF DRSPTMCTDK 120 WRNLLKEFKK AKHHDRGSGS AKMSYYKEIE EILKERSKNA QYKSPTPPKI DSYIQFSDKG 180 IEDNALSFGP VEAGGRPSLN LERQLDHDGH PLAITAADAV AATGIPPWNW REAPGNGGEG 240 QAFGGRVITV KWGDYTRRIG VDGTSEAIKE AIKSAFRLRT KRAFWLEDED QVVRSLDRDM 300 PLGNYTLHLD EGLAVKICLY DESDHLPVHT EEKIFYTEDE YREFLARRAW TCLREFDGYR 360 NIDNMDDLRP GALYRGVS

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MYLSDKPRPI DIYKEEGSRD MMIEVASNGD HHIQPHQPQQ THQQHQMMLG DSSGEDHEVK  60
APKKRAETWV QDETRSLISL RRGMDGLFNT SKSNKHLWEQ ISAKMRERGF DRSPTMCTDK  120
WRNLLKEFKK AKHHDRGSGS AKMSYYKEIE EILKERSKNA QYKSPTPPKI DSYIQFSDKG  180
IEDNALSFGP VEAGGRPSLN LERQLDHDGH PLAITAADAV AATGIPPWNW REAPGNGGEG  240
QAFGGRVITV KWGDYTRRIG VDGTSEAIKE AIKSAFRLRT KRAFWLEDED QVVRSLDRDM  300
PLGNYTLHLD EGLAVKICLY DESDHLPVHT EEKIFYTEDE YREFLARRAW TCLREFDGYR  360
NIDNMDDLRP GALYRGVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	0.0	Trihelix family protein