PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023002062.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | Trihelix | ||||||||
Protein Properties | Length: 488aa MW: 56277.5 Da PI: 7.3444 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 41.5 | 3.5e-13 | 94 | 145 | 1 | 57 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenl 57 +W+++e laL+++r+++++ + ++ We+vs+k+ e gf+r+p++Ckek+e+ XP_023002062.1 94 QWSNDELLALLRIRSNIDNCFPES-----TWEHVSRKLGEVGFTRTPEKCKEKFEDE 145 7******************99998.....9*************************96 PP | |||||||
2 | trihelix | 90.7 | 1.5e-28 | 365 | 465 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 rW+++evlaL+++r ++ ++ ++++ lk+plWe++s+ m + g++rs+k+Ckekwen+nk+++k+k+ +kkr s +s+tc XP_023002062.1 365 RWPRDEVLALVNVRCSLYDNNSNNNnnsdqdksggtdqatlLKAPLWERISQGMLQLGYKRSAKRCKEKWENINKYFRKTKDVNKKR-SIDSRTC 458 8*************944333333222455566677777888*********************************************8.78889** PP trihelix 80 pyfdqle 86 pyf+ql XP_023002062.1 459 PYFHQLS 465 *****95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 488 aa Download sequence |
MFEGSVSEQL HQFLAPRTTT TTTTTTPPNS NSLPFLLHSP NFNFHPFDSY NPSSNHHLVH 60 QSSENDNETT TTTTTMANLS VAMDLEEDHH HHNQWSNDEL LALLRIRSNI DNCFPESTWE 120 HVSRKLGEVG FTRTPEKCKE KFEDEKTEDG GAVVVVPEEA KHERGNDNND DNDEQQQSSK 180 SKKKRKTRTT RQREFEVLKG YCEDIVKNMM IQQEEIHSKL LHEMLKREEE KIAKEECWKK 240 QQMERFHKEL QMMAQEQAIA SDRQATIIEI LNQISISNPF SSSKSKKDLQ NLLHSLNHHH 300 NNNNNLPNSP SSSSLIQTQN PKNPSSSTQI LPPQDPNSNP PPFSIQKLPQ NPKTREKEVD 360 DVGKRWPRDE VLALVNVRCS LYDNNSNNNN NSDQDKSGGT DQATLLKAPL WERISQGMLQ 420 LGYKRSAKRC KEKWENINKY FRKTKDVNKK RSIDSRTCPY FHQLSTLYNQ GGNRSMENLP 480 DNVVRKPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28300.1 | 1e-72 | Trihelix family protein |