PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023002041.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 513aa MW: 59436 Da PI: 7.2525

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023002041.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	47.4	5.1e-15	94	153	1	65
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkik 65 +W+++e laL+++r+++++ + ++ We+vs+k+ e gf+r+p++Ckek+e+ ++++ i+ XP_023002041.1 94 QWSNDELLALLRIRSNIDNCFPES-----TWEHVSRKLGEVGFTRTPEKCKEKFEDESRYFNHIN 153 7****************99998.....9*****************************9886 PP
2	trihelix	90.6	1.6e-28	390	490	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 rW+++evlaL+++r ++ ++ ++++ lk+plWe++s+ m + g++rs+k+Ckekwen+nk+++k+k+ +kkr s +s+tc XP_023002041.1 390 RWPRDEVLALVNVRCSLYDNNSNNNnnsdqdksggtdqatlLKAPLWERISQGMLQLGYKRSAKRCKEKWENINKYFRKTKDVNKKR-SIDSRTC 483 8***********944333333222455566677777888*****************************************8.78889 PP trihelix 80 pyfdqle 86 pyf+ql XP_023002041.1 484 PYFHQLS 490 *****95 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MFEGSVSEQL HQFLAPRTTT TTTTTTPPNS NSLPFLLHSP NFNFHPFDSY NPSSNHHLVH 60 QSSENDNETT TTTTTMANLS VAMDLEEDHH HHNQWSNDEL LALLRIRSNI DNCFPESTWE 120 HVSRKLGEVG FTRTPEKCKE KFEDESRYFN HINYNKTCMF LTTHELNYHQ ETEDGGAVVV 180 VPEEAKHERG NDNNDDNDEQ QQSSKSKKKR KTRTTRQREF EVLKGYCEDI VKNMMIQQEE 240 IHSKLLHEML KREEEKIAKE ECWKKQQMER FHKELQMMAQ EQAIASDRQA TIIEILNQIS 300 ISNPFSSSKS KKDLQNLLHS LNHHHNNNNN LPNSPSSSSL IQTQNPKNPS SSTQILPPQD 360 PNSNPPPFSI QKLPQNPKTR EKEVDDVGKR WPRDEVLALV NVRCSLYDNN SNNNNNSDQD 420 KSGGTDQATL LKAPLWERIS QGMLQLGYKR SAKRCKEKWE NINKYFRKTK DVNKKRSIDS 480 RTCPYFHQLS TLYNQGGNRS MENLPDNVVR KPL

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MFEGSVSEQL HQFLAPRTTT TTTTTTPPNS NSLPFLLHSP NFNFHPFDSY NPSSNHHLVH  60
QSSENDNETT TTTTTMANLS VAMDLEEDHH HHNQWSNDEL LALLRIRSNI DNCFPESTWE  120
HVSRKLGEVG FTRTPEKCKE KFEDESRYFN HINYNKTCMF LTTHELNYHQ ETEDGGAVVV  180
VPEEAKHERG NDNNDDNDEQ QQSSKSKKKR KTRTTRQREF EVLKGYCEDI VKNMMIQQEE  240
IHSKLLHEML KREEEKIAKE ECWKKQQMER FHKELQMMAQ EQAIASDRQA TIIEILNQIS  300
ISNPFSSSKS KKDLQNLLHS LNHHHNNNNN LPNSPSSSSL IQTQNPKNPS SSTQILPPQD  360
PNSNPPPFSI QKLPQNPKTR EKEVDDVGKR WPRDEVLALV NVRCSLYDNN SNNNNNSDQD  420
KSGGTDQATL LKAPLWERIS QGMLQLGYKR SAKRCKEKWE NINKYFRKTK DVNKKRSIDS  480
RTCPYFHQLS TLYNQGGNRS MENLPDNVVR KPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28300.1	1e-72	Trihelix family protein