PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023002033.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 515aa MW: 59755.3 Da PI: 7.3876

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023002033.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	41	5.1e-13	94	155	1	65
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkik 65 +W+++e laL+++r+++++ + ++ We+vs++ e gf+r+p++Ckek+e+ ++++ i+ XP_023002033.1 94 QWSNDELLALLRIRSNIDNCFPES-----TWEHVSRYRklGEVGFTRTPEKCKEKFEDESRYFNHIN 155 7****************99998.....9*986669********************9886 PP
2	trihelix	90.6	1.7e-28	392	492	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 rW+++evlaL+++r ++ ++ ++++ lk+plWe++s+ m + g++rs+k+Ckekwen+nk+++k+k+ +kkr s +s+tc XP_023002033.1 392 RWPRDEVLALVNVRCSLYDNNSNNNnnsdqdksggtdqatlLKAPLWERISQGMLQLGYKRSAKRCKEKWENINKYFRKTKDVNKKR-SIDSRTC 485 8***********944333333222455566677777888*****************************************8.78889 PP trihelix 80 pyfdqle 86 pyf+ql XP_023002033.1 486 PYFHQLS 492 *****95 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MFEGSVSEQL HQFLAPRTTT TTTTTTPPNS NSLPFLLHSP NFNFHPFDSY NPSSNHHLVH 60 QSSENDNETT TTTTTMANLS VAMDLEEDHH HHNQWSNDEL LALLRIRSNI DNCFPESTWE 120 HVSRYRKLGE VGFTRTPEKC KEKFEDESRY FNHINYNKTC MFLTTHELNY HQETEDGGAV 180 VVVPEEAKHE RGNDNNDDND EQQQSSKSKK KRKTRTTRQR EFEVLKGYCE DIVKNMMIQQ 240 EEIHSKLLHE MLKREEEKIA KEECWKKQQM ERFHKELQMM AQEQAIASDR QATIIEILNQ 300 ISISNPFSSS KSKKDLQNLL HSLNHHHNNN NNLPNSPSSS SLIQTQNPKN PSSSTQILPP 360 QDPNSNPPPF SIQKLPQNPK TREKEVDDVG KRWPRDEVLA LVNVRCSLYD NNSNNNNNSD 420 QDKSGGTDQA TLLKAPLWER ISQGMLQLGY KRSAKRCKEK WENINKYFRK TKDVNKKRSI 480 DSRTCPYFHQ LSTLYNQGGN RSMENLPDNV VRKPL

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MFEGSVSEQL HQFLAPRTTT TTTTTTPPNS NSLPFLLHSP NFNFHPFDSY NPSSNHHLVH  60
QSSENDNETT TTTTTMANLS VAMDLEEDHH HHNQWSNDEL LALLRIRSNI DNCFPESTWE  120
HVSRYRKLGE VGFTRTPEKC KEKFEDESRY FNHINYNKTC MFLTTHELNY HQETEDGGAV  180
VVVPEEAKHE RGNDNNDDND EQQQSSKSKK KRKTRTTRQR EFEVLKGYCE DIVKNMMIQQ  240
EEIHSKLLHE MLKREEEKIA KEECWKKQQM ERFHKELQMM AQEQAIASDR QATIIEILNQ  300
ISISNPFSSS KSKKDLQNLL HSLNHHHNNN NNLPNSPSSS SLIQTQNPKN PSSSTQILPP  360
QDPNSNPPPF SIQKLPQNPK TREKEVDDVG KRWPRDEVLA LVNVRCSLYD NNSNNNNNSD  420
QDKSGGTDQA TLLKAPLWER ISQGMLQLGY KRSAKRCKEK WENINKYFRK TKDVNKKRSI  480
DSRTCPYFHQ LSTLYNQGGN RSMENLPDNV VRKPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28300.1	1e-72	Trihelix family protein