PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023001734.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 305aa    MW: 34239.5 Da    PI: 8.4832
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023001734.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.57.9e-34511911128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sg 81 
                     lp+G++F+Ptd+e++ e+L++k+ ++       ++++   ++   +i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++      + 
  XP_023001734.1  51 LPAGVKFDPTDQEIL-EHLEAKAISDArklhplIDEFIPtLEGEnGICYTHPQKLP-GVRKDGQIRHFFHRPSKAYTTGTRKRRKVHtdeegnET 143
                     799***********9.889988766664665442222222333336**********.666677788******************74434555578 PP

             NAM  82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     +W++tgk+++v++ +g+++g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  XP_023001734.1 144 RWHKTGKTRPVMV-GGAVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHL 191
                     8************.9*************66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MSWCSGSDDD ESSASLHQLA SVVLPAPLRC PSCGHPIQLQ DQAGIHDLPG LPAGVKFDPT  60
DQEILEHLEA KAISDARKLH PLIDEFIPTL EGENGICYTH PQKLPGVRKD GQIRHFFHRP  120
SKAYTTGTRK RRKVHTDEEG NETRWHKTGK TRPVMVGGAV KGFKKILVLY TNYGRQRKPE  180
KTNWVMHQYH LGNNEEEKDG EVVVSKVFYQ TQPRQCSSTT TNNALLQSEI KFKTAAANHH  240
HHPDPSPATL VDYYNAASTN FISFDQHSES PVPQLLPNLV RTGDGSSFIR FPPPDTTTRK  300
LDRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-120NAC family protein