PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023001568.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Trihelix
Protein Properties Length: 379aa    MW: 42458.3 Da    PI: 5.6988
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023001568.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix73.53.6e-23305368164
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykki 64 
                     rW++ ev+ Li +r+++e+++r++ +k+  Wee+s  m++ g++rs+k+Ckekwen+nk++k++
  XP_023001568.1 305 RWPRAEVQSLISLRTSLEHKFRATGSKGSIWEEISVEMQKVGYNRSAKKCKEKWENMNKYFKRT 368
                     8*************************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MDLFTGDHRI PSSDSFPQHV APFPDSTDLL YAAPSAVFPS ADIIAHLPNP PPPPQKLRPI  60
RCNGRSPAGS QADNIFDGAL RSFQCVSSSP EGGFSGDQLC VANIDPCQYF NSSEKDDKPD  120
AKDNGGFSDI IGNNFFSEEE TKNGGTDAAI AAENLSRSLE GPQLDDDSCS TSDGGDDVLS  180
TKKHLNHKRK RTTRSLELFV ENLIMKVMNK QEEMHRQLID MIEKNEKERI VREEAWKQRE  240
IERMRRDEEL RAQETSRSLA IISFIQNLLG HEIQISQPVE NHCTEDDGGE SSIQKELKSD  300
PSSRRWPRAE VQSLISLRTS LEHKFRATGS KGSIWEEISV EMQKVGYNRS AKKCKEKWEN  360
MNKYFKRTIG TGKASIANG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47660.16e-56Trihelix family protein