PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023001529.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 1513aa MW: 169387 Da PI: 8.5416

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023001529.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.5	0.00022	1422	1445	2	23
EET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirtH 23 +Cp Cgk F ++ +L++H r+H XP_023001529.1 1422 VCPvkGCGKKFFSHKYLVQHRRVH 1445 69999*****************99 PP
2	zf-C2H2	11.8	0.00074	1481	1507	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H XP_023001529.1 1481 YVCAepGCGQTFRFVSDFSRHKRKtgH 1507 899999****************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1513 aa Download sequence
MAATALAAEP PQEVLSWLKT LPLAPEYHPT LAEFQDPISY IFKIEKEASK FGICKIVPPV 60 SPSPKKTVIV NFNRSLAARA PCSDTSDSKS PPTFTTRQQQ IGFCPRKTRP VQKSVWQSGE 120 YYTFQQFEAK AKSFEKSYLK KCVKKGGLSP LEIETLYWRA TLDKPFSVEY ANDMPGSAFV 180 PVNAKMLREA GEGTTLGETA WNMRGVSRAK GSLLKFMKEE IPGVTSPMVY VAMMFSWFAW 240 HVEDHDLHSL NYLHMGAGKT WYGVPRDAAV AFEEVVRVQG YGGEINPLVT FAVLGEKITV 300 MSPEVLVSAG VPCCRLVQNA GEFVVTFPRA YHTGFSHGFN CGEAANIATP EWVRLAKDAA 360 IRRASINYPP MVSHFQLLYD LALSSRSPLC TGAEPRSSRL KNKRKSEGEA VIKELFVQNI 420 VENNSLLDIL GRGASVVLLP PGSSDSIYSR QRIGSHPRAK SRFPVGFCSS KEETKSSQSF 480 DYDNLTLENS QGMNQVKGFY SANRLYSTLS ERNMENLCDS RSKTSNGSNE RGGNVLSDGL 540 TDQRLFSCVT CGILSFACVA IVQPREQAAR YLMSADCSFF NDWAVGSGIA IRDGHAVSSQ 600 QISNSGKRDT CVSDGLYDVP VQAVNRQLPI ADESYKANLS TEKRNETSAL GMLALAYGHS 660 SDSEEDNAEA DAALNPGDAK LTVCSSGNQY QYDNSGLTSS ENCKNTATLD HNASSFGVNT 720 TDQMHFQIND YEEFGQARCS SESEMDGIGS TKKNGLSPRY QDLHVNDRSS LDADTEKPTF 780 DESTEPVEIE NMPFAPDIDE DSSRLHVFCL EHAKEVEQQL RPIGGAHILL LCHPDYPKME 840 AEAKVVAQEL SMDHVWTDTT FRGATEDEER RIQLALDSEE AIPGHGDWAV KLGINLFYSA 900 NLSHSPLYSK QMPYNSVIYN AFGRSATPNA SGKPKVYQRR TAGKLKRLVA GKWCGKVWMS 960 NQVHPLLAKR DPQQEDVDVF HSWTMPDEKF DRKSENVRKN ETVMVNRKSA GKRKMTRGSG 1020 TAKKAKPRES EDMVSDDSVE DCVDQHHNIH RNKRYKFVEI NDAMSDDSVE DDSCGKHGGV 1080 SISKGVTYCR TYDTGSEDSL GDRRNQQHRG FSGFKLPKWG EIEPAVSDDS LEHDSSRHRE 1140 QHIRIPRSKQ TNVLKKNVVS HDIRDDSFLW HHQRTSRSKK AKSIESEDVV SEDSVENDSH 1200 QHRSRPQRKP AKSTAREDVF SDDPDEDDNS LLQHRRNMQF NTSDNQLDDS VDQYRRRVLR 1260 SKPVKAETIS QMKQEILRSA KRGASQTLKE EFAQSLKCGG RHTSNLETPQ PRIQHAANRH 1320 GKQAKRNSKS TDLESENEQP GGPSTRLRKR TLKPTKLTEA KLKDKKPISK KKVKNSSSLK 1380 TPAGRRDSKA AGDEESEYLC DIEGCNMSFG SKQELVVHKR NVCPVKGCGK KFFSHKYLVQ 1440 HRRVHMDDRP LKCPWKGCKM TFKWAWARTE HIRVHTGARP YVCAEPGCGQ TFRFVSDFSR 1500 HKRKTGHSTK KGR

Sequence ? help Back to Top

Protein Sequence Length: 1513 aa Download sequence

MAATALAAEP PQEVLSWLKT LPLAPEYHPT LAEFQDPISY IFKIEKEASK FGICKIVPPV  60
SPSPKKTVIV NFNRSLAARA PCSDTSDSKS PPTFTTRQQQ IGFCPRKTRP VQKSVWQSGE  120
YYTFQQFEAK AKSFEKSYLK KCVKKGGLSP LEIETLYWRA TLDKPFSVEY ANDMPGSAFV  180
PVNAKMLREA GEGTTLGETA WNMRGVSRAK GSLLKFMKEE IPGVTSPMVY VAMMFSWFAW  240
HVEDHDLHSL NYLHMGAGKT WYGVPRDAAV AFEEVVRVQG YGGEINPLVT FAVLGEKITV  300
MSPEVLVSAG VPCCRLVQNA GEFVVTFPRA YHTGFSHGFN CGEAANIATP EWVRLAKDAA  360
IRRASINYPP MVSHFQLLYD LALSSRSPLC TGAEPRSSRL KNKRKSEGEA VIKELFVQNI  420
VENNSLLDIL GRGASVVLLP PGSSDSIYSR QRIGSHPRAK SRFPVGFCSS KEETKSSQSF  480
DYDNLTLENS QGMNQVKGFY SANRLYSTLS ERNMENLCDS RSKTSNGSNE RGGNVLSDGL  540
TDQRLFSCVT CGILSFACVA IVQPREQAAR YLMSADCSFF NDWAVGSGIA IRDGHAVSSQ  600
QISNSGKRDT CVSDGLYDVP VQAVNRQLPI ADESYKANLS TEKRNETSAL GMLALAYGHS  660
SDSEEDNAEA DAALNPGDAK LTVCSSGNQY QYDNSGLTSS ENCKNTATLD HNASSFGVNT  720
TDQMHFQIND YEEFGQARCS SESEMDGIGS TKKNGLSPRY QDLHVNDRSS LDADTEKPTF  780
DESTEPVEIE NMPFAPDIDE DSSRLHVFCL EHAKEVEQQL RPIGGAHILL LCHPDYPKME  840
AEAKVVAQEL SMDHVWTDTT FRGATEDEER RIQLALDSEE AIPGHGDWAV KLGINLFYSA  900
NLSHSPLYSK QMPYNSVIYN AFGRSATPNA SGKPKVYQRR TAGKLKRLVA GKWCGKVWMS  960
NQVHPLLAKR DPQQEDVDVF HSWTMPDEKF DRKSENVRKN ETVMVNRKSA GKRKMTRGSG  1020
TAKKAKPRES EDMVSDDSVE DCVDQHHNIH RNKRYKFVEI NDAMSDDSVE DDSCGKHGGV  1080
SISKGVTYCR TYDTGSEDSL GDRRNQQHRG FSGFKLPKWG EIEPAVSDDS LEHDSSRHRE  1140
QHIRIPRSKQ TNVLKKNVVS HDIRDDSFLW HHQRTSRSKK AKSIESEDVV SEDSVENDSH  1200
QHRSRPQRKP AKSTAREDVF SDDPDEDDNS LLQHRRNMQF NTSDNQLDDS VDQYRRRVLR  1260
SKPVKAETIS QMKQEILRSA KRGASQTLKE EFAQSLKCGG RHTSNLETPQ PRIQHAANRH  1320
GKQAKRNSKS TDLESENEQP GGPSTRLRKR TLKPTKLTEA KLKDKKPISK KKVKNSSSLK  1380
TPAGRRDSKA AGDEESEYLC DIEGCNMSFG SKQELVVHKR NVCPVKGCGK KFFSHKYLVQ  1440
HRRVHMDDRP LKCPWKGCKM TFKWAWARTE HIRVHTGARP YVCAEPGCGQ TFRFVSDFSR  1500
HKRKTGHSTK KGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein