PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023001005.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 797aa MW: 92062.7 Da PI: 8.4358

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023001005.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.7	2.6e-25	97	204	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkkekdgkwev 78 fY+eYAk+ GFsv +++s++s+ +g++++++f C+k+g ++e+ +++ r++r+ ++t+Cka+++vk+ ++gkw + XP_023001005.1 97 FYKEYAKSFGFSVIIKASRRSRISGKFIDAKFACTKYGDKRESGVVevsdpvsnsnngigvhgkKKRGRTNRSWEKTDCKACMHVKRLQSGKWAI 191 *************************************9999877899*********99899999********************* PP FAR1 79 tkleleHnHelap 91 +++ +eHnHe++p XP_023001005.1 192 HSFIQEHNHEVFP 204 ********875 PP

Sequence ? help Back to Top
Protein Sequence Length: 797 aa Download sequence
MFLYRSRTAV RATKETITGL NMDDNSVHCG KEMCTRDGTD GYSHMVGKEN TGPTVNMDMP 60 KYRNIEYSQN LLNLKSFKIV EPREGMEFES KETAFTFYKE YAKSFGFSVI IKASRRSRIS 120 GKFIDAKFAC TKYGDKRESG VVEVSDPVSN SNNGIGVHGK KKRGRTNRSW EKTDCKACMH 180 VKRLQSGKWA IHSFIQEHNH EVFPDESYYF HGHGNLEVGS SNTDVLHSNR ARRKSKLCMK 240 SKLSGGCTIA KKQNVAAIDQ VCKARRLAID EGDVQVMLDH FVCMQDENPN FFYSIDLNEK 300 QCLRNVFWVD AKGRLDYANF ADVVFFDTTY IKNEYRLSFA PFIGVNHHCQ FVLLGCSLVA 360 DETKPTYAWL MRAWLRAMHK CPPKVILTVQ DEALKEAIAE ELPNSFHCYC LWDIYSKIPE 420 KLSHVMRQRE NFISMFDKCV FKSWTIEEFE KRWLRIVDRF ELSHDSWFKS LYADRNRWIP 480 ACMKNIFLAG MYTRHRPEGI NSFLDKYIQR KTSLREFLDH YRTFARDKFE EEGKADLETL 540 HKQPGLKSPS PFGKQMAGLY THAIFKKFQV EVLGVVACHP RKISEDGVIK VFRVQDFENN 600 QDFLVEWNEA TLDISCLCRS FEFNGYLCRH VMIVLQISGI HSIPSQYVLT RWTRDAKSRQ 660 QTQKGSHVES RVQRYIDLCQ QVFRLSNEGS LSHESYNVAF DALEEALRKC ESLNVSIQPS 720 LVARSSSSHE SEEVNQGKNT NKDNKKNTTN VSRQDCFEPE INTVRIHDGW QQLAPALHYP 780 DEQGGSQGVV RLTLDAL

Sequence ? help Back to Top

Protein Sequence Length: 797 aa Download sequence

MFLYRSRTAV RATKETITGL NMDDNSVHCG KEMCTRDGTD GYSHMVGKEN TGPTVNMDMP  60
KYRNIEYSQN LLNLKSFKIV EPREGMEFES KETAFTFYKE YAKSFGFSVI IKASRRSRIS  120
GKFIDAKFAC TKYGDKRESG VVEVSDPVSN SNNGIGVHGK KKRGRTNRSW EKTDCKACMH  180
VKRLQSGKWA IHSFIQEHNH EVFPDESYYF HGHGNLEVGS SNTDVLHSNR ARRKSKLCMK  240
SKLSGGCTIA KKQNVAAIDQ VCKARRLAID EGDVQVMLDH FVCMQDENPN FFYSIDLNEK  300
QCLRNVFWVD AKGRLDYANF ADVVFFDTTY IKNEYRLSFA PFIGVNHHCQ FVLLGCSLVA  360
DETKPTYAWL MRAWLRAMHK CPPKVILTVQ DEALKEAIAE ELPNSFHCYC LWDIYSKIPE  420
KLSHVMRQRE NFISMFDKCV FKSWTIEEFE KRWLRIVDRF ELSHDSWFKS LYADRNRWIP  480
ACMKNIFLAG MYTRHRPEGI NSFLDKYIQR KTSLREFLDH YRTFARDKFE EEGKADLETL  540
HKQPGLKSPS PFGKQMAGLY THAIFKKFQV EVLGVVACHP RKISEDGVIK VFRVQDFENN  600
QDFLVEWNEA TLDISCLCRS FEFNGYLCRH VMIVLQISGI HSIPSQYVLT RWTRDAKSRQ  660
QTQKGSHVES RVQRYIDLCQ QVFRLSNEGS LSHESYNVAF DALEEALRKC ESLNVSIQPS  720
LVARSSSSHE SEEVNQGKNT NKDNKKNTTN VSRQDCFEPE INTVRIHDGW QQLAPALHYP  780
DEQGGSQGVV RLTLDAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein