PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023000959.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 534aa    MW: 58291.9 Da    PI: 5.6131
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023000959.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS415.83.8e-1271545161373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgd..pmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                     lv+ L++cA+ ++ gd+ la +l+ +++ l+s   +   + ++a yf  AL +r++          p  +t +++  e+   ++ ++e++P+lkf
  XP_023000959.1 154 LVHMLVTCADSIHRGDFPLAGSLIVEMQSLVSGINTdcGIGKVAGYFIDALTRRVFT---------PHDTTITTTGYENELLYHHYYEACPYLKF 239
                     689***************************8865532499****************9.........444444556888889999*********** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +h+taNqaIlea++g+++vH+iDf++++GlQWpaL+qaLa Rp+gpp lR+Tg+g+p+s+ +++l+e+g rLa++A++++v+f f+ ++a+rled
  XP_023000959.1 240 AHFTANQAILEAFDGHDCVHVIDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSSDGRDSLREIGLRLAELARSVNVRFAFRGVAASRLED 334
                     *********************************************************************************************** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++++L+v+p+E++aVn+++qlhrll ++  ++s+ + vL  +++l+Pk+v+vveqeadhn++ Fl+rf+eal yys++fdslea        ++
  XP_023000959.1 335 VKPWMLQVNPKETVAVNSIMQLHRLLGNNNRSSSAMEMVLGWIRNLNPKIVTVVEQEADHNQTGFLDRFTEALFYYSTMFDSLEACC---MMPEK 426
                     ***********************************************************************************9995...55566 PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                      + +++l+rei+nvv+ceg +r+erhe l kWr+rl++aGF +++l+++a kqa++ll  ++ +g++vee++g+l+lgW++rpL+++SaW
  XP_023000959.1 427 ALAEMYLQREICNVVSCEGPARVERHEPLVKWRSRLRQAGFIALHLGSNAFKQASMLLTLFSAEGFSVEENEGCLTLGWHSRPLIAASAW 516
                     677788************************************************************************************ PP
Sequence ? help Back to Top
Protein Sequence    Length: 534 aa     Download sequence    
MAPFDSAASS GTSSSGSSSS SSSTVTKPQD IDGLLAGAGY KVRASDLHHV AQRLERLESA  60
MVNSSSEISQ LASETVHYNP SDIASWVDSI LSELNQTTSL PSDILDFPDL IPGSNQTAGN  120
VSWTDPCVAA QHQNLSHNQL TVVTAMEEDS GIKLVHMLVT CADSIHRGDF PLAGSLIVEM  180
QSLVSGINTD CGIGKVAGYF IDALTRRVFT PHDTTITTTG YENELLYHHY YEACPYLKFA  240
HFTANQAILE AFDGHDCVHV IDFNLMHGLQ WPALIQALAL RPGGPPLLRL TGIGPPSSDG  300
RDSLREIGLR LAELARSVNV RFAFRGVAAS RLEDVKPWML QVNPKETVAV NSIMQLHRLL  360
GNNNRSSSAM EMVLGWIRNL NPKIVTVVEQ EADHNQTGFL DRFTEALFYY STMFDSLEAC  420
CMMPEKALAE MYLQREICNV VSCEGPARVE RHEPLVKWRS RLRQAGFIAL HLGSNAFKQA  480
SMLLTLFSAE GFSVEENEGC LTLGWHSRPL IAASAWHAAP PPDATANHPF GGTV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-140GRAS family protein