PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023000172.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 372aa MW: 41144.9 Da PI: 10.4072

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023000172.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	50.4	5.7e-16	65	152	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +Li+a e+ +l+rg+lk+++W+ev++ + +++ r+ +qCk++++ ++k+yk +k+ + + + s++p++d+l+ XP_023000172.1 65 CWSEGATSVLIDAWGERYLELSRGNLKQKHWKEVADIVssreDYTKIPRTDIQCKNRIDTVKKKYKTEKAKISAG--GGPSKWPFYDRLD 152 7***********************************87666677899*****************99997..67779****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MKDDDEIQSS GSPASPISNG RITVTVAAAP PPPTPPSQNT ITLALPNQQS KGSGGGSGGG 60 GREDCWSEGA TSVLIDAWGE RYLELSRGNL KQKHWKEVAD IVSSREDYTK IPRTDIQCKN 120 RIDTVKKKYK TEKAKISAGG GPSKWPFYDR LDQLIGPASK NPVSSAGVAT TVNPPLQNQK 180 VPLGIPVVNR PLIPYQAHHN HNHQQQQKGQ KAQKVQFHKR PRTDSDSSGS ERETSPTSSD 240 SYRLGNYRRK SARVQKEVVN PNLGQMGKTE KGRSGSREKG WRNAVSKLTE AILKFGEAYE 300 QAESSKLQQV VEMEKQRMKF AKDLELQRMQ FFMKTQLEIS QLKHGRRVVA AGNHHCSNNN 360 NNNNHSNSES SN

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MKDDDEIQSS GSPASPISNG RITVTVAAAP PPPTPPSQNT ITLALPNQQS KGSGGGSGGG  60
GREDCWSEGA TSVLIDAWGE RYLELSRGNL KQKHWKEVAD IVSSREDYTK IPRTDIQCKN  120
RIDTVKKKYK TEKAKISAGG GPSKWPFYDR LDQLIGPASK NPVSSAGVAT TVNPPLQNQK  180
VPLGIPVVNR PLIPYQAHHN HNHQQQQKGQ KAQKVQFHKR PRTDSDSSGS ERETSPTSSD  240
SYRLGNYRRK SARVQKEVVN PNLGQMGKTE KGRSGSREKG WRNAVSKLTE AILKFGEAYE  300
QAESSKLQQV VEMEKQRMKF AKDLELQRMQ FFMKTQLEIS QLKHGRRVVA AGNHHCSNNN  360
NNNNHSNSES SN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	6e-80	Trihelix family protein