PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023000031.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 590aa    MW: 66045.2 Da    PI: 8.2647
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023000031.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS256.31.1e-782015822374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl...fsevsPilkf 93 
                     ++lL  cA+a+ +gd++++++lL+ l+elasp+gd+++Rlaay ++ALa+ l++  s++y++ ++ +  +  s++  ++++    f+evsP++ f
  XP_023000031.1 201 EQLLNPCANAIIKGDATRVHHLLCVLQELASPTGDANHRLAAYGLRALAHYLSS-NSSCYSSSSTVAPVTFASTDLRFFQRSlikFHEVSPWFAF 294
                     689*************************************************99.556665554444443334444333333466********** PP

            GRAS  94 shltaNqaIleavege....ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg.........skeeleetgerLakfAeelgv 174
                      + +aN+ Il  +++e    + +Hi+D+++s+G+QWp+Ll+aL+ R+ ++pp +R+T++++  ++               ++ +rL +fA++l++
  XP_023000031.1 295 PNNIANSSILHILSEEpnrsRNLHILDIGVSHGVQWPTLLEALTRRSgGPPPLIRLTVIAPTVEHdqnaetpfsIGPPGDNISSRLLSFAKSLNI 389
                     *************9999888899************************55566*******9987777777777766677899************** PP

            GRAS 175 pfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adh.nsesFlerflealeyysa 266
                     ++++n l  ++l++++ + +   p+E l+V+ +++lh+l    +  ++er e+L+ +++++Pk v+++e++  +++ n ++F ++f++++ey + 
  XP_023000031.1 390 NLQINRLDNRSLQSFNSQVIGKLPDEILIVCAQFRLHQLK---HYAPDERFEFLQNLRKIEPKAVILSENNmaCSCnNCGNFDTGFTRKVEYLWR 481
                     ******9999*****************************8...66667789********************555557788*************** PP

            GRAS 267 lfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvl 360
                     ++ds+++ +    + r + Er++++ e+   ++++g++    +e++ekW er+++aGF    ++e++ ++a++ +r+++ ++++rvee++g++ l
  XP_023000031.1 482 FLDSTSSAF----KGRESEERKVMEGEAARGLTNQGEM----NEEMEKWCERMRNAGFARKLFGEDTIDTARASMRRYDnNWEMRVEEKDGCVGL 568
                     *****7775....6666666667777788889999998....89999********************************9999************ PP

            GRAS 361 gWkdrpLvsvSaWr 374
                      Wk++p+ ++S+W+
  XP_023000031.1 569 WWKGQPVSFCSFWK 582
                     *************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 590 aa     Download sequence    
MSLHPKPSNP LNSIFLPPSP HQKDIFSFPL CLKYFSPRKM TIEEPGANHP SDHILDWLAD  60
SVPFFSSPFP DDSYNSSSIN CYQWWDENQD IGQDLINGCL SSSPTTVSTK PPNTSTSHHL  120
TPSDLTKKRK APDDTVHKPS QTQQNQRKNQ NNQSKNGADK GSGAVEGVTV IKKSVGNKRN  180
SSKATGNNNH NGSNKEGRWA EQLLNPCANA IIKGDATRVH HLLCVLQELA SPTGDANHRL  240
AAYGLRALAH YLSSNSSCYS SSSTVAPVTF ASTDLRFFQR SLIKFHEVSP WFAFPNNIAN  300
SSILHILSEE PNRSRNLHIL DIGVSHGVQW PTLLEALTRR SGGPPPLIRL TVIAPTVEHD  360
QNAETPFSIG PPGDNISSRL LSFAKSLNIN LQINRLDNRS LQSFNSQVIG KLPDEILIVC  420
AQFRLHQLKH YAPDERFEFL QNLRKIEPKA VILSENNMAC SCNNCGNFDT GFTRKVEYLW  480
RFLDSTSSAF KGRESEERKV MEGEAARGLT NQGEMNEEME KWCERMRNAG FARKLFGEDT  540
IDTARASMRR YDNNWEMRVE EKDGCVGLWW KGQPVSFCSF WKLGMKSNGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.11e-162GRAS family protein