PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022999478.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 425aa MW: 48287.9 Da PI: 9.9117

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022999478.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	111.3	1e-34	97	242	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra....... 77 lp+G++F+Ptd+el+ +L++kve+k+ + +e+i+++d i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ XP_022999478.1 97 LPAGVKFDPTDQELI-GHLEAKVEAKNdikshplI--DEFIPTLDgedgICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqtecdi 187 799**********.89**99987775332..234555545556******.555666799**************75666665 PP NAM 78 ...tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_022999478.1 188 qggGGETRWHKTGKTRPVMV-NGRQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 242 54433778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MPIDENLQFQ VDIKLERGKE KERKIVKHLS RRTIQRRQKN DVEYEELLES MNMKSNLGSI 60 TSSDLIDAKL EEHQKCGSKQ CPGCGHKLEV KSEWLGLPAG VKFDPTDQEL IGHLEAKVEA 120 KNDIKSHPLI DEFIPTLDGE DGICYTHPEK LPGVTRDGLS RHFFHRPSKA YTTGTRKRRK 180 IQTECDIQGG GGETRWHKTG KTRPVMVNGR QKGCKKILVL YTNFGKNRKP EKTNWVMHQY 240 HLGQHEEERE GELVVSKIFY QTQPRQCNWS SSDKAAASAE VTGDNVVLSK RENVSGSYSP 300 SRQMATRQRD DISPVGGGGG GLCPPPHFAA TYGGLDHIQP FKADHFSFGP FRRTFDEVLE 360 KLPRARGSEI IATTMITIFP WRLLHFKQPV LQIQSPRSSA RLLSTIPRSF STMTRTEFHK 420 TKAFR

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MPIDENLQFQ VDIKLERGKE KERKIVKHLS RRTIQRRQKN DVEYEELLES MNMKSNLGSI  60
TSSDLIDAKL EEHQKCGSKQ CPGCGHKLEV KSEWLGLPAG VKFDPTDQEL IGHLEAKVEA  120
KNDIKSHPLI DEFIPTLDGE DGICYTHPEK LPGVTRDGLS RHFFHRPSKA YTTGTRKRRK  180
IQTECDIQGG GGETRWHKTG KTRPVMVNGR QKGCKKILVL YTNFGKNRKP EKTNWVMHQY  240
HLGQHEEERE GELVVSKIFY QTQPRQCNWS SSDKAAASAE VTGDNVVLSK RENVSGSYSP  300
SRQMATRQRD DISPVGGGGG GLCPPPHFAA TYGGLDHIQP FKADHFSFGP FRRTFDEVLE  360
KLPRARGSEI IATTMITIFP WRLLHFKQPV LQIQSPRSSA RLLSTIPRSF STMTRTEFHK  420
TKAFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-139	NAC family protein