PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022999176.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | YABBY | ||||||||
Protein Properties | Length: 193aa MW: 21715.6 Da PI: 8.7645 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 203.6 | 7.7e-63 | 6 | 165 | 4 | 170 |
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveee..nlksnvekeesastsv 96 +s+ eq+Cy+ CnfCn +lavsvP + +f +vtvrCGhC++l svn+a a q l+ ++ + ++ + l ++ +l s + +++ + XP_022999176.1 6 NSAQEQLCYIPCNFCNIVLAVSVPCSNIFDIVTVRCGHCSNLWSVNMAAAFQSLSWQNS---QASNHTHSGLAADHYraELGSSSKCNNKMKMRA 97 6789***********************************************99999886...333333333222222002222222222222222 PP YABBY 97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + + ++n+d+ + +r Pek+qrvPsayn+fikeeiqrika+nPdi+hreafs+aaknWahfP+ihfgl XP_022999176.1 98 PI-RNPTNDDQRII-----NRAPEKKQRVPSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGL 165 22.22555555554.....8****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MSSCINSAQE QLCYIPCNFC NIVLAVSVPC SNIFDIVTVR CGHCSNLWSV NMAAAFQSLS 60 WQNSQASNHT HSGLAADHYR AELGSSSKCN NKMKMRAPIR NPTNDDQRII NRAPEKKQRV 120 PSAYNQFIKE EIQRIKANNP DITHREAFST AAKNWAHFPH IHFGLMLETN NLQTKTKSDG 180 SEKHLMSVPG LHY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 2e-83 | YABBY family protein |