PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022998067.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 552aa    MW: 60128.4 Da    PI: 4.5387
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022998067.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3957.9e-1211765351373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv++Ll+cAea++ ++l+la++lL++++ l+  +g +m+++a yf++AL +++++        l+p++  e++ss +   +  f+  +P++kf+h
  XP_022998067.1 176 LVHTLLACAEAIDINNLNLADTLLKHIRILVEAQGGAMRKVAGYFAQALTHHIYG--------LHPQKPFEYTSSYTDLLQMNFYVSCPYMKFAH 262
                     689****************************************************........55555554555555455556************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     +taNqaIle+v ++ +vH++Df+++qGlQWpaL+qaLa Rp+gpp + +Tg+g+p  + s++ l+e+  +La+fA+++gv+fef+   +++l++l
  XP_022998067.1 263 FTANQAILESVGTAATVHVVDFSLQQGLQWPALIQALALRPGGPPAFYLTGIGPPPGEnSSDGLQEVVLKLAQFADTIGVEFEFRGYFCNDLAEL 357
                     ******************************************************88778************************************ PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +++ L+++  E+++Vn++++lhrll++++++e+    vLk++k+l+Pk+v+vve  adhn++sF  rf+eal+yys+lfdsle +l  + ee++ 
  XP_022998067.1 358 DPSLLNLE-SETVIVNSIFELHRLLAHPGAIEK----VLKTIKELNPKIVTVVEPVADHNGPSFTGRFTEALHYYSSLFDSLEGSL--AGEEDVA 445
                     *****885.7***********************....************************************************8..5577788 PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373
                      ++e+lgr+i nvva eg++r+erhetl++W++rl+++GF+ vpl+++a kqa++ll+ ++ ++gyrvee++gsl+lgW++rpL+++SaW
  XP_022998067.1 446 GSEEYLGRQILNVVAGEGSDRVERHETLAQWQSRLGSSGFEMVPLGSNAFKQASTLLALFGgGNGYRVEENNGSLTLGWHTRPLIATSAW 535
                     88889************************************************************************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 552 aa     Download sequence    
MKRDHSYQSP NPAGKAKIWP EEDDDEDELL AALGYNVRLS DMADVALKLK QLEMVMGLSE  60
EDGISHLSSN TVHYNPSDVS SWVQSMLAEL NTDDSVFAEA ESTSAIAAFA DDSEYDLRAI  120
PGVAVFPQID SNTPRKRFKK SESESVLVTA ASSSSSSSEP SRTVVLTDST DNGVHLVHTL  180
LACAEAIDIN NLNLADTLLK HIRILVEAQG GAMRKVAGYF AQALTHHIYG LHPQKPFEYT  240
SSYTDLLQMN FYVSCPYMKF AHFTANQAIL ESVGTAATVH VVDFSLQQGL QWPALIQALA  300
LRPGGPPAFY LTGIGPPPGE NSSDGLQEVV LKLAQFADTI GVEFEFRGYF CNDLAELDPS  360
LLNLESETVI VNSIFELHRL LAHPGAIEKV LKTIKELNPK IVTVVEPVAD HNGPSFTGRF  420
TEALHYYSSL FDSLEGSLAG EEDVAGSEEY LGRQILNVVA GEGSDRVERH ETLAQWQSRL  480
GSSGFEMVPL GSNAFKQAST LLALFGGGNG YRVEENNGSL TLGWHTRPLI ATSAWAELAR  540
PSLSKPESFD KM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.10.0GRAS family protein