PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022997995.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 410aa MW: 46687.3 Da PI: 7.5632

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022997995.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	64	3.3e-20	73	167	2	86
trihelix 2 WtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 Wt qe++ Li+a++ ++er ++ + +W++v ++++++g++rs++qC++kw+nl ++ykk++e e++ ++++s++p + ++ XP_022997995.1 73 WTLQETMILITAKKLDDERRNKVTlappadptarkGGELRWKWVENYCWSHGCHRSQNQCNDKWDNLLRDYKKVREYESRA-CDQQSQIPSYWKM 166 ************9999999864444444555447899************************************85.99999****** PP trihelix 86 e 86 e XP_022997995.1 167 E 167 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MSDPPTTSSE PPHQQQHHPH PTHHHHHPHH HQQQQQQQLL HLPLIHGGAA RINTAAATSS 60 STVIVREYRK GNWTLQETMI LITAKKLDDE RRNKVTLAPP ADPTARKGGE LRWKWVENYC 120 WSHGCHRSQN QCNDKWDNLL RDYKKVREYE SRACDQQSQI PSYWKMEKHE RKDNNLPSNM 180 AFEVYQALND VVQRKFSQRP VISHTTPTPL VALPPAPPPS SAIPALPPPP PTTATNSSPA 240 VSESSSSGTE SSEKKEKAEA KRRKMEDNIE RSAAMLAQTL RSCEEQREIR HQEVMEVQKR 300 CLQIEEARNH IHRQGISDMV AAIANLSAEI DDRERRRSEG YECSYNGEEV RMLKQQNEAM 360 QAEVMNVKTE LSQLRDQMPS LMQTMMHNML HNIPPPPPPS MDPSGSGGDA

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MSDPPTTSSE PPHQQQHHPH PTHHHHHPHH HQQQQQQQLL HLPLIHGGAA RINTAAATSS  60
STVIVREYRK GNWTLQETMI LITAKKLDDE RRNKVTLAPP ADPTARKGGE LRWKWVENYC  120
WSHGCHRSQN QCNDKWDNLL RDYKKVREYE SRACDQQSQI PSYWKMEKHE RKDNNLPSNM  180
AFEVYQALND VVQRKFSQRP VISHTTPTPL VALPPAPPPS SAIPALPPPP PTTATNSSPA  240
VSESSSSGTE SSEKKEKAEA KRRKMEDNIE RSAAMLAQTL RSCEEQREIR HQEVMEVQKR  300
CLQIEEARNH IHRQGISDMV AAIANLSAEI DDRERRRSEG YECSYNGEEV RMLKQQNEAM  360
QAEVMNVKTE LSQLRDQMPS LMQTMMHNML HNIPPPPPPS MDPSGSGGDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	5e-48	Trihelix family protein