PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022997904.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 451aa MW: 50828 Da PI: 8.2497

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022997904.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	127.1	7.1e-40	150	226	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC++d+s++k+y+r+h+vCe hsk+p+v++ g e+rfCqqCsrfh++sefD +krsCrrrL++hn+rrrk+q+ XP_022997904.1 150 CQVEGCNMDISNVKDYYRKHRVCESHSKSPKVIIGGFERRFCQQCSRFHSISEFDGKKRSCRRRLSNHNARRRKPQS 226 **************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MEWNARPPLQ WDWDNLTVLN PSYSEHTGDD RTTGGPFFKL GQTSPKISKS VSTNSSFFEK 60 SRTTKFTLEG FEPTLEDSCN KKEFVEAEVV STYGTPETST CSCEPMLSLK LGKQAYFENA 120 SAVNLTKPSA LMVESRATRK RCQNTPSAHC QVEGCNMDIS NVKDYYRKHR VCESHSKSPK 180 VIIGGFERRF CQQCSRFHSI SEFDGKKRSC RRRLSNHNAR RRKPQSKVVG LNPARLSSWD 240 FENRQIDIFS DKLSLIYPTP NEKSAWESAF SSRHPQCGKY VSKPEPTYGS IGQLNVSEDE 300 MCYVHAMPYH DNTSKAVPFK GAATKILDPE GYVIPSNLNS AQDLQRALSL LSTDTKGPYE 360 ARLFAPDNPN RLVNPNYANQ PSISQSPMNL GIQTLPFASV DSQSWGNGHH HPIELQMQIH 420 HPNIEGGNNL FQDFQLFKTP CEIGMFSNQI S

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MEWNARPPLQ WDWDNLTVLN PSYSEHTGDD RTTGGPFFKL GQTSPKISKS VSTNSSFFEK  60
SRTTKFTLEG FEPTLEDSCN KKEFVEAEVV STYGTPETST CSCEPMLSLK LGKQAYFENA  120
SAVNLTKPSA LMVESRATRK RCQNTPSAHC QVEGCNMDIS NVKDYYRKHR VCESHSKSPK  180
VIIGGFERRF CQQCSRFHSI SEFDGKKRSC RRRLSNHNAR RRKPQSKVVG LNPARLSSWD  240
FENRQIDIFS DKLSLIYPTP NEKSAWESAF SSRHPQCGKY VSKPEPTYGS IGQLNVSEDE  300
MCYVHAMPYH DNTSKAVPFK GAATKILDPE GYVIPSNLNS AQDLQRALSL LSTDTKGPYE  360
ARLFAPDNPN RLVNPNYANQ PSISQSPMNL GIQTLPFASV DSQSWGNGHH HPIELQMQIH  420
HPNIEGGNNL FQDFQLFKTP CEIGMFSNQI S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	206	223	KKRSCRRRLSNHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	2e-47	SBP family protein