PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022997679.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 657aa    MW: 75067.6 Da    PI: 6.3403
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022997679.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3772.4e-1152876543373
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL++cA+avs+ d++ a++lL++++++++p+gd +qRla +f+++L++rla  ++ ly  ++++ets    ++ l+ +++f +++P+ ++s++ 
  XP_022997679.1 287 TLLIQCAQAVSNYDQRTANELLNQIRHHSNPSGDGNQRLAYFFAKGLETRLAA-GTPLYMPFASNETS---AADILKTYQMFIKACPFRRMSYFY 377
                     69**************************************************9.99999888888877...9*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN++Il+ +e+ +r+Hi+Df+i +GlQWp+L+q L++Rp+gpp+lRiTg++ p++g   +e++e+tg+rLa+++++++vpfe +v +a+++e+++
  XP_022997679.1 378 ANRTILKLAENVTRLHIVDFGILYGLQWPCLIQRLSNRPGGPPKLRITGIELPQPGfrPAERVEQTGRRLAHYCKRFNVPFEHKV-LAQKWETVK 471
                     *******************************************************9****************************9.6******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +e+L+v+++E ++V +++++++++de+v  +s+rd+vLkl+++++P+++++   + + n++ F +rf eal yys+lfd++ea++pr++ +r   
  XP_022997679.1 472 YEDLNVDRDELTIVTCMFRMKNVPDETVVANSPRDKVLKLIRKINPDLFIHEVTNGSFNTPFFNTRFKEALFYYSSLFDMYEATVPRDNPQRYLC 566
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     Ere+lgr+i+nv+aceg er+er et+++W+ r ++aGFk+vpl+++  k+++ ++++ + + + v+++ +++++gWk+r +  +S+W
  XP_022997679.1 567 EREILGRDIMNVIACEGLERVERPETYKQWQVRNTRAGFKQVPLDQELLKNVEKIVNTEYHQDFAVDQDGAWMLQGWKGRIIDGLSCW 654
                     **********************************************************99888************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 657 aa     Download sequence    
MDNLLDDFPN SWNNFHYNPL LSNGFFNVNR EIFDPLHHNS SSSSTSPSLS PSSTEGNSPD  60
CHDTSNTMLK YITEMLLDEE EDLKTKPCML IDCLALQAAE KSFYDVLGKK YPPPPIGLGD  120
STQNFSSDLG FFKAEDESES FNGDSSVFPP SDKPLLSQDS LFGMQYIFHF RQGAVEASKF  180
LPVNGKFGTI DLYNDSSASV PSRAVDFSWL AAVGDARSTL PNGLFREKKN HQREDSDEEG  240
ESRQSPSWGS DESSENESNK KSRKKTKGKK NRSRKQESCV EVVDLWTLLI QCAQAVSNYD  300
QRTANELLNQ IRHHSNPSGD GNQRLAYFFA KGLETRLAAG TPLYMPFASN ETSAADILKT  360
YQMFIKACPF RRMSYFYANR TILKLAENVT RLHIVDFGIL YGLQWPCLIQ RLSNRPGGPP  420
KLRITGIELP QPGFRPAERV EQTGRRLAHY CKRFNVPFEH KVLAQKWETV KYEDLNVDRD  480
ELTIVTCMFR MKNVPDETVV ANSPRDKVLK LIRKINPDLF IHEVTNGSFN TPFFNTRFKE  540
ALFYYSSLFD MYEATVPRDN PQRYLCEREI LGRDIMNVIA CEGLERVERP ETYKQWQVRN  600
TRAGFKQVPL DQELLKNVEK IVNTEYHQDF AVDQDGAWML QGWKGRIIDG LSCWVVA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1263276RKKTKGKKNRSRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-160GRAS family protein