PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022997678.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 684aa    MW: 78123 Da    PI: 6.0989
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022997678.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS376.82.7e-1153146813373
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL++cA+avs+ d++ a++lL++++++++p+gd +qRla +f+++L++rla  ++ ly  ++++ets    ++ l+ +++f +++P+ ++s++ 
  XP_022997678.1 314 TLLIQCAQAVSNYDQRTANELLNQIRHHSNPSGDGNQRLAYFFAKGLETRLAA-GTPLYMPFASNETS---AADILKTYQMFIKACPFRRMSYFY 404
                     69**************************************************9.99999888888877...9*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN++Il+ +e+ +r+Hi+Df+i +GlQWp+L+q L++Rp+gpp+lRiTg++ p++g   +e++e+tg+rLa+++++++vpfe +v +a+++e+++
  XP_022997678.1 405 ANRTILKLAENVTRLHIVDFGILYGLQWPCLIQRLSNRPGGPPKLRITGIELPQPGfrPAERVEQTGRRLAHYCKRFNVPFEHKV-LAQKWETVK 498
                     *******************************************************9****************************9.6******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +e+L+v+++E ++V +++++++++de+v  +s+rd+vLkl+++++P+++++   + + n++ F +rf eal yys+lfd++ea++pr++ +r   
  XP_022997678.1 499 YEDLNVDRDELTIVTCMFRMKNVPDETVVANSPRDKVLKLIRKINPDLFIHEVTNGSFNTPFFNTRFKEALFYYSSLFDMYEATVPRDNPQRYLC 593
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     Ere+lgr+i+nv+aceg er+er et+++W+ r ++aGFk+vpl+++  k+++ ++++ + + + v+++ +++++gWk+r +  +S+W
  XP_022997678.1 594 EREILGRDIMNVIACEGLERVERPETYKQWQVRNTRAGFKQVPLDQELLKNVEKIVNTEYHQDFAVDQDGAWMLQGWKGRIIDGLSCW 681
                     **********************************************************99888************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 684 aa     Download sequence    
MDNLLDDFPN SWNNFHYNPL LSNGFFNVNR EIFDPLHHNS SSSSTSPSLS PSSTEGNSPD  60
CHDTSNTMLK YITEMLLDEE EDLKTKPCML IDCLALQAAE KSFYDVLGKK YPPPPIGLGD  120
STQNFSSDLG FFKAEDESES FNGDSSVFPP SDKPLLSQDS LFGMQYIFHF RQGAVEASKF  180
LPVNGKFGTI DLYNDSSASV PSRAVDFSWL AAVGDARSTL PNGLFREKKN HQREDSDEEL  240
RNTKQSATFA DDSSLSELFD ELLLCRGESR QSPSWGSDES SENESNKKSR KKTKGKKNRS  300
RKQESCVEVV DLWTLLIQCA QAVSNYDQRT ANELLNQIRH HSNPSGDGNQ RLAYFFAKGL  360
ETRLAAGTPL YMPFASNETS AADILKTYQM FIKACPFRRM SYFYANRTIL KLAENVTRLH  420
IVDFGILYGL QWPCLIQRLS NRPGGPPKLR ITGIELPQPG FRPAERVEQT GRRLAHYCKR  480
FNVPFEHKVL AQKWETVKYE DLNVDRDELT IVTCMFRMKN VPDETVVANS PRDKVLKLIR  540
KINPDLFIHE VTNGSFNTPF FNTRFKEALF YYSSLFDMYE ATVPRDNPQR YLCEREILGR  600
DIMNVIACEG LERVERPETY KQWQVRNTRA GFKQVPLDQE LLKNVEKIVN TEYHQDFAVD  660
QDGAWMLQGW KGRIIDGLSC WVVA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1290303RKKTKGKKNRSRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.11e-170GRAS family protein