PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022997624.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | YABBY | ||||||||
Protein Properties | Length: 196aa MW: 21709.7 Da PI: 6.8661 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 184.8 | 4.6e-57 | 11 | 177 | 5 | 166 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveeenlksnvek.eesast 94 + seq+ yvqC+ C+til+v+vP++ l++vv vrCG Ct llsvn+ak s ll++ sh +l +e ++l+v+++ + n + ++ ++ XP_022997624.1 11 DPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSfipfDLLTSLSH---NLPKEPFQDLNVQKHLCLDNLNNtSDLLTS 102 679********************************************998655555555555...666665666666655444333330333333 PP YABBY 95 svssekl...senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPki 166 +++ + ++++ +p +p v++PPek+qr+Psayn+fikeei+r+ka+nP ++h+eaf +aaknWah+P++ XP_022997624.1 103 YHNIIQNhedDDDDAIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPGMAHKEAFKTAAKNWAHLPPV 177 333333211133333334555669*************************************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MSSTLEQLLP DPSEQIRYVQ CGLCSTILLV NVPYSNLSMV VSVRCGNCTG LLSVNMAKPS 60 FIPFDLLTSL SHNLPKEPFQ DLNVQKHLCL DNLNNTSDLL TSYHNIIQNH EDDDDDAIII 120 PPTPVVNKPP EKKQRAPSAY NQFIKEEIRR LKAENPGMAH KEAFKTAAKN WAHLPPVNGE 180 GDHVGSGRKG KSLISN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 3e-37 | YABBY family protein |