PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022997034.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family BBR-BPC
Protein Properties Length: 322aa    MW: 36018.8 Da    PI: 10.2354
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022997034.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind384.61.5e-11713221301
       GAGA_bind   1 mdddgsre..rnkg.yyepa..aslkenl..glqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllve 88 
                     mdd g+re  r+k+ +y++a  + + +++   +q+m+++aerda+i+ernlalsekkaa+aerdmaflqrd+a+aern+al+erdn++++l++++
  XP_022997034.1   1 MDDGGHREngRHKTdHYKSAqgQWMMQHQpsMKQIMTIMAERDAAIQERNLALSEKKAALAERDMAFLQRDAAIAERNNALLERDNAIATLQYRD 95 
                     9*****9999***999996656445545422469***********************************************************99 PP

       GAGA_bind  89 nsla...salpvgvqvlsgtksidslqqlse..pqledsavelreeeklealpieeaaeeakekkkkkkrqrakk...pkekkak...kkkkkse 172
                      sl     ++p+g+q+ +g+k+i++ qq++   p++++s ++ re + +ea p++  a+e +++++kk++q++k+   p +k +k   k+k++se
  XP_022997034.1  96 SSLPnnsLSCPPGCQIARGVKHIHHPQQHTVhiPHMNESNYNSRELHPNEASPLSPVASELTKTRRKKRTQEGKTvttPNKKVSKaprKVKRESE 190
                     987667789******************944347******************99998888877777777666555411133333331112222222 PP

       GAGA_bind 173 kskkkvkkesader.............skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaR 254
                     + +          +             +++++k +dl+ln+v++Dest+P+P+CsCtG+ rqCYkWGnGGWqSaCCtttiS+yPLP+++++r+aR
  XP_022997034.1 191 DLN----------KvmvgkahgigndhKQSDWKGQDLGLNQVAFDESTMPAPICSCTGVIRQCYKWGNGGWQSACCTTTISMYPLPAVPNKRHAR 275
                     222..........12223334555565999***************************************************************** PP

       GAGA_bind 255 iagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     ++grKmS++af+klL++L+aeG+dls pvDLk+ WAkHGtn+++ti+
  XP_022997034.1 276 LGGRKMSGSAFNKLLNRLTAEGHDLSAPVDLKNNWAKHGTNRYITIK 322
                     **********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MDDGGHRENG RHKTDHYKSA QGQWMMQHQP SMKQIMTIMA ERDAAIQERN LALSEKKAAL  60
AERDMAFLQR DAAIAERNNA LLERDNAIAT LQYRDSSLPN NSLSCPPGCQ IARGVKHIHH  120
PQQHTVHIPH MNESNYNSRE LHPNEASPLS PVASELTKTR RKKRTQEGKT VTTPNKKVSK  180
APRKVKRESE DLNKVMVGKA HGIGNDHKQS DWKGQDLGLN QVAFDESTMP APICSCTGVI  240
RQCYKWGNGG WQSACCTTTI SMYPLPAVPN KRHARLGGRK MSGSAFNKLL NRLTAEGHDL  300
SAPVDLKNNW AKHGTNRYIT IK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160186RRKKRTQEGKTVTTPNKKVSKAPRKVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-137BBR-BPC family protein