PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022996918.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Trihelix
Protein Properties Length: 364aa    MW: 42099.2 Da    PI: 6.7596
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022996918.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix88.19.8e-2869150286
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     W ++e++ Li++rrem+  ++++k++k+lWe++s+kmrergf rsp++C++kw+nl k++kk k+++++     + +++y++++e
  XP_022996918.1  69 WVQDETRSLIALRREMDGLFNTSKSNKHLWEQISAKMRERGFDRSPTMCTDKWRNLLKEFKKAKHHDRGS---GTAKMSYYKEIE 150
                     ********************************************************************84...445799***997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MYLSDKPRPI DIYKEEGSRD MMIEVASNGD HHIQPHQPQP THQQHQMMLG DSSGEDHEVK  60
APKKRAETWV QDETRSLIAL RREMDGLFNT SKSNKHLWEQ ISAKMRERGF DRSPTMCTDK  120
WRNLLKEFKK AKHHDRGSGT AKMSYYKEIE EILKERSKST QYKSPTPPKI DSYIQFSDKG  180
GRPSLNLERQ LDHDGHPLAI TAADAVAATG IPPWNWREAP GNDGESQAFG GRVISVKWGD  240
YTRRIGIDGT SEAIKEAIKS AFRLRTKRAF WLEDEDQVVR SLDRDMPLGN YTLHLDEGLA  300
VKICLYDESD HLPVHTEEKI FYIEEDYRDF LTRRGWTCLR EFDGYRNIDT MDDLRPGAIY  360
RGIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13450.10.0Trihelix family protein