PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022996398.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 260aa MW: 28413.6 Da PI: 6.4316

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022996398.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.0004	105	127	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++sF++ L H +H XP_022996398.1 105 YECKTCNRSFPSFQALGGHRASH 127 99**********99999998887 PP
2	zf-C2H2	14.4	0.00011	179	201	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H XP_022996398.1 179 HECSICGLEFSSGQALGGHMRRH 201 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
METPEEFMGS NDQIHIIPVQ PHRNKRMKLL SGGADATSSS SCGGGGAGDE FAASSSVSDE 60 VSTEEEEDMA NCLILLAQGD THRGPSQITN KRLNFEKPKA GFYVYECKTC NRSFPSFQAL 120 GGHRASHKKP KPITAVEESE EQQQVNKAIP IAAAASAVQI QVKTETTTNS QTQKSGKIHE 180 CSICGLEFSS GQALGGHMRR HRTTAVSTNT DQHDHKRRNI LELDLNLPAP EEDLRETKFQ 240 FTTTPQTIVF AAPTLVDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	7e-51	C2H2 family protein