PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022995259.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 602aa    MW: 65960.4 Da    PI: 6.2557
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022995259.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS347.91.6e-1062386023374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     + ++e+A a+s+g+l  ++++La + + ++ +g+++qRla y++ AL++r++       + +pp  ++    +e+ aa++ +++vsP++k+++++
  XP_022995259.1 238 QSVIEAAAAISEGKLDVVDEILAPVVKFSNARGSSVQRLAEYMVFALKSRVNP------AEFPPPVAE-IFGDEHSAATQSLYDVSPCFKLAFMA 325
                     6789************************************************9......444444333.46999********************* PP

            GRAS  98 aNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                     aN aIlea+e+e +++H++Dfdi++G+Q+++L++ L+ R++g+  +++T+v++ e+g+ e+l+++ge L+++A+elgv f+fn+ v ++l++l+ 
  XP_022995259.1 326 ANLAILEAIEEEdRKLHVVDFDIGKGGQYMNLIHLLSGRQKGKVVVKLTAVVA-ENGRDERLKQVGESLSQLAKELGVGFKFNM-VKHELAALTR 418
                     ************7788*************************************.779**************************9.799******* PP

            GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
                     e+L ++ +E+laVn++++l++++desvs+e++rde+L+ vk l P vv+v+eqe+++n+++F++r++e++ yy +lfds+++++  ++ +r+kvE
  XP_022995259.1 419 ESLGCDADESLAVNFAFKLYQMPDESVSTENPRDELLRRVKALAPAVVTVMEQELNTNTAPFAARVSESCIYYGSLFDSIDSTVWCDHPDRVKVE 513
                     *********************************************************************************************** PP

            GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +  lgr++ n +aceg+er+er+e  +kWr+r+++aGF++ ++se +a+++k+ l+  +  + g++v+ee+g +++gW++r+L++++aWr
  XP_022995259.1 514 EG-LGRKLANSLACEGRERVERCEVSGKWRARMGMAGFESRRMSEMVAESMKTRLSSGYrvNPGFTVKEENGGICFGWMGRTLTVTTAWR 602
                     **.*************************************************98887655889**************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 602 aa     Download sequence    
MQSGFTGGGP PDFYTSGRSM TNPSHPNPYR SQLSGGAFVD PTIPQIARQI PSSLLGKRNL  60
SDLHSLNQYT HHNLPVNNLF LRSVKPRAGF SHPISPLSNF DLYSTMSLPS SEVQTHRLYG  120
SSSAAVLQQL RQQPNSSAVT LRDLQNLDLE KKMMMNHRLQ ELEKQLLEDN DDDDGSDAAS  180
VITSSTSAWC ETMYNLISPT APPNQKPVST SPTTSASSSC SSSTSSSVAS PSSDSWKQSV  240
IEAAAAISEG KLDVVDEILA PVVKFSNARG SSVQRLAEYM VFALKSRVNP AEFPPPVAEI  300
FGDEHSAATQ SLYDVSPCFK LAFMAANLAI LEAIEEEDRK LHVVDFDIGK GGQYMNLIHL  360
LSGRQKGKVV VKLTAVVAEN GRDERLKQVG ESLSQLAKEL GVGFKFNMVK HELAALTRES  420
LGCDADESLA VNFAFKLYQM PDESVSTENP RDELLRRVKA LAPAVVTVME QELNTNTAPF  480
AARVSESCIY YGSLFDSIDS TVWCDHPDRV KVEEGLGRKL ANSLACEGRE RVERCEVSGK  540
WRARMGMAGF ESRRMSEMVA ESMKTRLSSG YRVNPGFTVK EENGGICFGW MGRTLTVTTA  600
WR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-134GRAS family protein