PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022995159.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

YABBY

Protein Properties

Length: 169aa MW: 18814.4 Da PI: 9.1747

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022995159.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	213.8	5.7e-66	6	158	5	169
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 +se+vCyv+CnfCntilavsvP + +f++vtvrCGhCt+llsvn+ + q+l+ ++ + +++l+ e++ k +++++ s+ s XP_022995159.1 6 MASERVCYVHCNFCNTILAVSVPCNNMFTLVTVRCGHCTNLLSVNMGASLQVLPPQEG---HKQPQLAS----PEDSSKDRGSSSSKCSKIGSL- 92 689************************************************99985...22222222....222222222222222222222. PP YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 e+ +++ r+pp irPPekrqr+Psaynrfik eiqrika+nPdishreafs+aaknWah+P+ih g XP_022995159.1 93 ---ESAERDQHRIPP-IRPPEKRQRIPSAYNRFIKAEIQRIKANNPDISHREAFSTAAKNWAHLPHIHLG 158 ...344455556667.9*************************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence
MSLDMMASER VCYVHCNFCN TILAVSVPCN NMFTLVTVRC GHCTNLLSVN MGASLQVLPP 60 QEGHKQPQLA SPEDSSKDRG SSSSKCSKIG SLESAERDQH RIPPIRPPEK RQRIPSAYNR 120 FIKAEIQRIK ANNPDISHRE AFSTAAKNWA HLPHIHLGQK LDGNNKQSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	1e-69	YABBY family protein