PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022995158.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family YABBY
Protein Properties Length: 179aa    MW: 19978.8 Da    PI: 9.4476
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022995158.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY228.51.8e-7061685169
           YABBY   5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 
                      +se+vCyv+CnfCntilavsvP + +f++vtvrCGhCt+llsvn+  + q+l+ ++ + +++k  + e +k+ + +  +  +k++ +s+s+ s+
  XP_022995158.1   6 MASERVCYVHCNFCNTILAVSVPCNNMFTLVTVRCGHCTNLLSVNMGASLQVLPPQEVIPRQIK--ISEGHKQPQLASPEDSSKDRGSSSSKCSK 98 
                     689******************************************************9777765..44444444333333333333333333333 PP

           YABBY 100 kl.senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169
                         e+ +++  r+pp irPPekrqr+Psaynrfik eiqrika+nPdishreafs+aaknWah+P+ih g
  XP_022995158.1  99 IGsLESAERDQHRIPP-IRPPEKRQRIPSAYNRFIKAEIQRIKANNPDISHREAFSTAAKNWAHLPHIHLG 168
                     3313455566666667.9***************************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MSLDMMASER VCYVHCNFCN TILAVSVPCN NMFTLVTVRC GHCTNLLSVN MGASLQVLPP  60
QEVIPRQIKI SEGHKQPQLA SPEDSSKDRG SSSSKCSKIG SLESAERDQH RIPPIRPPEK  120
RQRIPSAYNR FIKAEIQRIK ANNPDISHRE AFSTAAKNWA HLPHIHLGQK LDGNNKQSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.19e-67YABBY family protein