PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022994624.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family E2F/DP
Protein Properties Length: 383aa    MW: 42892 Da    PI: 8.8893
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022994624.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP74.89.1e-242388171
         E2F_TDP  1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
                    rk+ksL+ll+++fl+l+++ e   + l+++a++L    v  +rRRiYDi+NVLe+++++++k+kn+++w+g
  XP_022994624.1 23 RKQKSLGLLCSNFLSLYNHDEVHSIGLDDAASRL---GV--ERRRIYDIVNVLESVGVLSRKAKNQYSWNG 88
                    79*****************999************...**..****************************98 PP
2E2F_TDP76.13.4e-24157237171
         E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 
                     r+eksL lltq+f+kl+ +s+ ++++l+e+a+ L+ +      +++k+RR+YDi+NVL+++nliek     ++k+++rw g
  XP_022994624.1 157 RREKSLALLTQNFVKLFICSHVNMISLDEAARLLLGDghnssIMRTKVRRLYDIANVLSSMNLIEKthttdTRKPAFRWLG 237
                     689**************************************999**************************99*******87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MAALPSSSAL PDSSSSRHHT YSRKQKSLGL LCSNFLSLYN HDEVHSIGLD DAASRLGVER  60
RRIYDIVNVL ESVGVLSRKA KNQYSWNGFG AIPKALQDLK EEGLKDNCSA SDGTDYAKVS  120
DDEDDDERLS NPTGSQNSTA TMPKSSSSLK AAYADNRREK SLALLTQNFV KLFICSHVNM  180
ISLDEAARLL LGDGHNSSIM RTKVRRLYDI ANVLSSMNLI EKTHTTDTRK PAFRWLGVRG  240
KVKNEPIVLP ESKKRAFGTD VTNVSYKKTK TENSAYPSLN HCLNMQKPVP CENSSQEDSQ  300
NSQDQECERT SKSYQFGPFA PVTVAKVGVL DNNNVKRTHD WESLSSTFRP QYHNQALKEL  360
FSHYVEAWKS WYSEAVKKPI QIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.21e-126E2F/DP family protein