PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022994514.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 394aa MW: 44773.8 Da PI: 9.6669

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022994514.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.2e-05	52	74	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H XP_022994514.1 52 YVCEICHQGFQRDQNLQMHRRRH 74 9*********************9 PP
2	zf-C2H2	13.5	0.00021	134	156	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k + +s++k H++t+ XP_022994514.1 134 WVCEKCAKGYAVQSDYKAHLKTC 156 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MVADLSSLDP LPNCFHSNGT NSKRKRRPTG TPDPDAEVVS LSPKTLLESD SYVCEICHQG 60 FQRDQNLQMH RRRHKVPWKL LKRTETTTTT TTTRKRVFVC PEPSCLHHNP THALGDLVGI 120 KKHFRRKHSN HKQWVCEKCA KGYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD 180 SCKLGHHQQP EKEASLQPPP PPPPCLSRTA SSPTPTPSSD TNFSFLNQTH TPKTPQKLIT 240 HHQNLDLQLS TSSNSIKVSV SPKKHENYAT HLQLSIGSCN YGEKNEQKDH YQMNFDEQIG 300 NGLSLLKLKE EAKQRMRVAR EEKAVAEEAR NEAKKQIELA EKELANAKRM RQQAQAELQR 360 ALALKEHAIN KINSTILQIT CQVCRQHFHP LHKT

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MVADLSSLDP LPNCFHSNGT NSKRKRRPTG TPDPDAEVVS LSPKTLLESD SYVCEICHQG  60
FQRDQNLQMH RRRHKVPWKL LKRTETTTTT TTTRKRVFVC PEPSCLHHNP THALGDLVGI  120
KKHFRRKHSN HKQWVCEKCA KGYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD  180
SCKLGHHQQP EKEASLQPPP PPPPCLSRTA SSPTPTPSSD TNFSFLNQTH TPKTPQKLIT  240
HHQNLDLQLS TSSNSIKVSV SPKKHENYAT HLQLSIGSCN YGEKNEQKDH YQMNFDEQIG  300
NGLSLLKLKE EAKQRMRVAR EEKAVAEEAR NEAKKQIELA EKELANAKRM RQQAQAELQR  360
ALALKEHAIN KINSTILQIT CQVCRQHFHP LHKT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	23	28	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	1e-110	C2H2 family protein