PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022994406.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 394aa MW: 43557.1 Da PI: 7.874

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022994406.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.5	6.9e-42	94	170	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC++dls++++yhrrhkvCe hsk+p+v++ gl+qrfCqqCsrfh+l+efDe+krsCr+rL++hn+rrrk+q+ XP_022994406.1 94 CLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQT 170 **************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MESMSVNEVE RTNQFTSATL VWEHLLSLHS APSFPSIFTL FFPPISTFLG TSKFQSSWKT 60 VFAETEVEKM ASSTSGSSKR ARGANNAGSQ PVSCLVDGCN SDLSNCRDYH RRHKVCELHS 120 KTPQVTIGGL KQRFCQQCSR FHSLEEFDEG KRSCRKRLDG HNRRRRKPQT DLLPRSAGPF 180 SYHQGSHLLP YTRAQVYPST TVSSHGWSST GETAGLHRDQ QLNFLEKQSL FVEQSHHSNN 240 YKTAQTLAFM HGGPTTTCQP LLRSMNTLSE NGGGGGGGGE RNKMIYDRFR IGVSESDCAL 300 SLLSSPQAQT DHQPQPQQAE SGSSGHLDLS RIEQHQRSAA VSLLQPLSHH HSHNSYENSD 360 SDNHGGALNF PGIFGIASEN AGNESPSTLP FHWE

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MESMSVNEVE RTNQFTSATL VWEHLLSLHS APSFPSIFTL FFPPISTFLG TSKFQSSWKT  60
VFAETEVEKM ASSTSGSSKR ARGANNAGSQ PVSCLVDGCN SDLSNCRDYH RRHKVCELHS  120
KTPQVTIGGL KQRFCQQCSR FHSLEEFDEG KRSCRKRLDG HNRRRRKPQT DLLPRSAGPF  180
SYHQGSHLLP YTRAQVYPST TVSSHGWSST GETAGLHRDQ QLNFLEKQSL FVEQSHHSNN  240
YKTAQTLAFM HGGPTTTCQP LLRSMNTLSE NGGGGGGGGE RNKMIYDRFR IGVSESDCAL  300
SLLSSPQAQT DHQPQPQQAE SGSSGHLDLS RIEQHQRSAA VSLLQPLSHH HSHNSYENSD  360
SDNHGGALNF PGIFGIASEN AGNESPSTLP FHWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	151	168	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	6e-52	SBP family protein