PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022994150.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 1557aa MW: 174662 Da PI: 8.3926

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022994150.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.9	0.00033	1466	1488	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H XP_022994150.1 1466 CPvkGCGKKFFSHKYLVQHRRVH 1488 9999*****************99 PP
2	zf-C2H2	11.6	0.00089	1524	1550	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H XP_022994150.1 1524 YVCAeqGCGQTFRFVSDFSRHKRKtgH 1550 89********************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1557 aa Download sequence
MAASAMAAEP TPEVLSWLKT LPLAPEYHPT LAEFQDPISY IFKIEKEASK FGICKIVPPV 60 LPSPKKAVIL NFNKSLAARA PCSDSINTKS PPTFTTRQQQ IGFCPRKTRP VQKPVWQSGE 120 YYTFQQFEAK AKAFEKSYLK KCTKKGGLSP LELETLYWRA TLDKPFSVEY ANDMPGSAFV 180 PVSTKMFREA GDGTTLGETA WNMRAVSRAK GSLLKFMKEE IPGVTSPMVY VAMLFSWFAW 240 HVEDHDLHSL NYLHMGAGKT WYGVPRDAAV AFEEVVRVQG YGGEINPLVT FAILGEKTTV 300 MSPEVLVSSG VPCCRLVQNA GEFVVTFPRA YHTGFSHGFN CAEAANIATP EWLRVAKDAA 360 IRRASINYPP MVSHFQLLYD LALSSRAPLC TGSEPRSSRL KDKRRSEGET VIKELFVQNI 420 FENNSLLDVL GSGVSVVLLP QGSSDSIYSR LRVGSHMRGK LRFPAGFCNS KEEAESPQSF 480 DYDNLTLENS QGMNRVKGLY SVNGLYSTLS ERSTGNLCAS SSRILNATNE RGGSIHCDGL 540 SDQRLFSCVT CGILSFACVA IVQPREQAAR YLMSADCSFF NDWVVGSGMT GEGIALRDGH 600 GVASNSGKRE RCVADGLYDV PVQAVNRQLP VADQSYKANF TAEKRNETSA LGMLALTYGH 660 SSDSEEDNAE ADAALHANDS KPTICSSVDQ YQFENSGLTS SEYCKNSATS NHDPLSANST 720 DQMQFQVNDF EEFGRARFDS KDSFNCSSEF ESDGIGSTKK NDLSTRYQDS HVNGKPSLDT 780 DTEKPMFEQS TEPVEIENMP FAPDIDEDSS RLHVFCLEHA KEVEQQLRPI GGVHILLLCH 840 PDYPKMEAEA KLMAQELSID HLWTDTTFRD ATQDEEKRIQ LSLDSEEAIP GNGDWSVKLG 900 INLFYSANLS HSPLYSKQMP YNSVIYNAFG RSTSANPSGK PKVYQRRSGK LKRVVVGKWC 960 GKVWMSNQIH PLLAKRDPQE EDVDGFPSWT ISDEKIEWKS DNIQKSETVN RKSAGKRKMT 1020 YGSGAATKKA EPIESEDIVS DNSGEDCIRQ HHRILQHKRS KIVASKDAMS DDSVEVFSYK 1080 KHGRVPVNEE AYCETDDPGL DEGPDESLGD RHTKLHRGFY GFKLPKWGEI EPAVSDDSLE 1140 RDSSQFRGKT SKSKIDKYVE RQDALSDECL ESPLKQYRRI PKSKQAKVVK KNAISHDIRD 1200 DSFLWHRQGT SRSKMATIDS EDAVSEDSFE NSSHQHMSTP RRKSAKRTAR ENVFSDDPDE 1260 DDTSLLHHRK NVRNVQSKYF ERENTPDDQL DDSANQCRTR VLRSKPVKKE TISQMKQEIL 1320 RPAKRGASRT LKEEFSQPLK RGGRHTLKLE TPQPTKQLAP NRRGKQAKRN SKLTDLESEE 1380 EPQPGGPSTR LRQRTPKPTK FSEVKPNDKK PVGKKKLKNA SSLKTPAGHR DSKARDEESE 1440 YLCDIEGCNM SFGSKQELAL HKRNICPVKG CGKKFFSHKY LVQHRRVHMD DRPLKCPWRG 1500 CKMTFKWAWA RTEHIRVHTG DRPYVCAEQG CGQTFRFVSD FSRHKRKTGH STKKGRG

Sequence ? help Back to Top

Protein Sequence Length: 1557 aa Download sequence

MAASAMAAEP TPEVLSWLKT LPLAPEYHPT LAEFQDPISY IFKIEKEASK FGICKIVPPV  60
LPSPKKAVIL NFNKSLAARA PCSDSINTKS PPTFTTRQQQ IGFCPRKTRP VQKPVWQSGE  120
YYTFQQFEAK AKAFEKSYLK KCTKKGGLSP LELETLYWRA TLDKPFSVEY ANDMPGSAFV  180
PVSTKMFREA GDGTTLGETA WNMRAVSRAK GSLLKFMKEE IPGVTSPMVY VAMLFSWFAW  240
HVEDHDLHSL NYLHMGAGKT WYGVPRDAAV AFEEVVRVQG YGGEINPLVT FAILGEKTTV  300
MSPEVLVSSG VPCCRLVQNA GEFVVTFPRA YHTGFSHGFN CAEAANIATP EWLRVAKDAA  360
IRRASINYPP MVSHFQLLYD LALSSRAPLC TGSEPRSSRL KDKRRSEGET VIKELFVQNI  420
FENNSLLDVL GSGVSVVLLP QGSSDSIYSR LRVGSHMRGK LRFPAGFCNS KEEAESPQSF  480
DYDNLTLENS QGMNRVKGLY SVNGLYSTLS ERSTGNLCAS SSRILNATNE RGGSIHCDGL  540
SDQRLFSCVT CGILSFACVA IVQPREQAAR YLMSADCSFF NDWVVGSGMT GEGIALRDGH  600
GVASNSGKRE RCVADGLYDV PVQAVNRQLP VADQSYKANF TAEKRNETSA LGMLALTYGH  660
SSDSEEDNAE ADAALHANDS KPTICSSVDQ YQFENSGLTS SEYCKNSATS NHDPLSANST  720
DQMQFQVNDF EEFGRARFDS KDSFNCSSEF ESDGIGSTKK NDLSTRYQDS HVNGKPSLDT  780
DTEKPMFEQS TEPVEIENMP FAPDIDEDSS RLHVFCLEHA KEVEQQLRPI GGVHILLLCH  840
PDYPKMEAEA KLMAQELSID HLWTDTTFRD ATQDEEKRIQ LSLDSEEAIP GNGDWSVKLG  900
INLFYSANLS HSPLYSKQMP YNSVIYNAFG RSTSANPSGK PKVYQRRSGK LKRVVVGKWC  960
GKVWMSNQIH PLLAKRDPQE EDVDGFPSWT ISDEKIEWKS DNIQKSETVN RKSAGKRKMT  1020
YGSGAATKKA EPIESEDIVS DNSGEDCIRQ HHRILQHKRS KIVASKDAMS DDSVEVFSYK  1080
KHGRVPVNEE AYCETDDPGL DEGPDESLGD RHTKLHRGFY GFKLPKWGEI EPAVSDDSLE  1140
RDSSQFRGKT SKSKIDKYVE RQDALSDECL ESPLKQYRRI PKSKQAKVVK KNAISHDIRD  1200
DSFLWHRQGT SRSKMATIDS EDAVSEDSFE NSSHQHMSTP RRKSAKRTAR ENVFSDDPDE  1260
DDTSLLHHRK NVRNVQSKYF ERENTPDDQL DDSANQCRTR VLRSKPVKKE TISQMKQEIL  1320
RPAKRGASRT LKEEFSQPLK RGGRHTLKLE TPQPTKQLAP NRRGKQAKRN SKLTDLESEE  1380
EPQPGGPSTR LRQRTPKPTK FSEVKPNDKK PVGKKKLKNA SSLKTPAGHR DSKARDEESE  1440
YLCDIEGCNM SFGSKQELAL HKRNICPVKG CGKKFFSHKY LVQHRRVHMD DRPLKCPWRG  1500
CKMTFKWAWA RTEHIRVHTG DRPYVCAEQG CGQTFRFVSD FSRHKRKTGH STKKGRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein