PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022994141.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 548aa MW: 60392.4 Da PI: 7.7281

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022994141.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	135.3	1.9e-42	177	253	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cqv gC++dls+ k+yh+rhkvCevhsk+++v+v+g+eqrfCqqCsrfh lsefD++krsCr+rLa+hnerrrk+q XP_022994141.1 177 CQVYGCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKRLAGHNERRRKPQV 253 **************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 548 aa Download sequence
MESWNYGSQG KGFLSDEMNS STNSLLKSKY SLLGWEFKIP CSFGDNILLS GGAQHVENQS 60 FGELEFPLMV GKQLPDDSFS DVLNTKIDGG RSLNLVLPTS HPLPGEEEST SKLSGSIVDS 120 NNRDSSLIDL KLGRFIDTGD AHTFKYSKRA AISSSTESST SYKKMRSQGV NFLTPFCQVY 180 GCNKDLSSSK DYHKRHKVCE VHSKTSKVIV NGIEQRFCQQ CSRFHLLSEF DDGKRSCRKR 240 LAGHNERRRK PQVSFHSGRA QRLLQPYNGN GDGRFQEKAL AATSFICKDI LSSGVYYPEK 300 LGKNDWCKRI KVEGKNDYNS MCATSVGDRL LNMKSPLLPY DVEVQIPCFQ GNGSNAAATE 360 NMSCDTSCQY SHNVGGLHMD THPLFHHTNL SSENFGVYDA ASTIQGVSGN PDYGCALSLL 420 SSHSQNASTH PSIVHVPRAF TMSESRSNYS MSELSEKLMG VSSQASSTGI SSKFASGMSE 480 AQMFPIMTGE SSDRSVTFQI TDGVLHRSGL GNAKANVAYE HTPTMDLLQL SSQLHRVEHQ 540 RHSMQDSV

Sequence ? help Back to Top

Protein Sequence Length: 548 aa Download sequence

MESWNYGSQG KGFLSDEMNS STNSLLKSKY SLLGWEFKIP CSFGDNILLS GGAQHVENQS  60
FGELEFPLMV GKQLPDDSFS DVLNTKIDGG RSLNLVLPTS HPLPGEEEST SKLSGSIVDS  120
NNRDSSLIDL KLGRFIDTGD AHTFKYSKRA AISSSTESST SYKKMRSQGV NFLTPFCQVY  180
GCNKDLSSSK DYHKRHKVCE VHSKTSKVIV NGIEQRFCQQ CSRFHLLSEF DDGKRSCRKR  240
LAGHNERRRK PQVSFHSGRA QRLLQPYNGN GDGRFQEKAL AATSFICKDI LSSGVYYPEK  300
LGKNDWCKRI KVEGKNDYNS MCATSVGDRL LNMKSPLLPY DVEVQIPCFQ GNGSNAAATE  360
NMSCDTSCQY SHNVGGLHMD THPLFHHTNL SSENFGVYDA ASTIQGVSGN PDYGCALSLL  420
SSHSQNASTH PSIVHVPRAF TMSESRSNYS MSELSEKLMG VSSQASSTGI SSKFASGMSE  480
AQMFPIMTGE SSDRSVTFQI TDGVLHRSGL GNAKANVAYE HTPTMDLLQL SSQLHRVEHQ  540
RHSMQDSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	5e-50	SBP family protein