PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022993882.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | Trihelix | ||||||||
Protein Properties | Length: 442aa MW: 50738.6 Da PI: 6.8773 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 80.7 | 2e-25 | 120 | 217 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt+++v++Li+a+++++++++++ +kk++W+ +sk+m+erg+++sp+qC++k+++lnkryk+++++ +++ +++++++ +++d XP_022993882.1 120 KWTDKMVKLLITAVSYIGDDINSDFdgagrrkchiiQKKGKWKLISKVMAERGYQVSPQQCEDKFNDLNKRYKRLNDIIGRGtSCKVVENPALLD 214 7**************999999975233455667999**********************************************5699999988887 PP trihelix 84 qle 86 le XP_022993882.1 215 VLE 217 765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 442 aa Download sequence |
MEGNLSQGGL IPGGTSYGGL DLQVPFKVHS QAQHSHALHQ QHHPHTRQGS AANPSIQEGF 60 SLSMGVVQNC DHAMSLVDFN KGERCKNSAS DEEPSFTEDG IDGHNETSKG KKGSVWHRVK 120 WTDKMVKLLI TAVSYIGDDI NSDFDGAGRR KCHIIQKKGK WKLISKVMAE RGYQVSPQQC 180 EDKFNDLNKR YKRLNDIIGR GTSCKVVENP ALLDVLEYLT DKEKDDVRKI LNSKQLFYEE 240 MCSYHNSNRL HLPHDPALQR SLQLAFRARD DHDNDEPRRH QNDDFDENEH DETDERDDFE 300 ENFASHGDNR RSFGVLGGSV KRLRRGQDHD DTHACGKSLS SHAHAQAQFA QADTAHLETE 360 GMKGSTSQKQ WMELRLLQLE DQKLQIQVEM LELEKQKFKW ERFNKKKDRE LEKMRMVNER 420 MKLENERIAL DLKQKEIGSG FH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21200.1 | 1e-157 | Trihelix family protein |