PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022993855.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 446aa MW: 47918.7 Da PI: 9.4995

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022993855.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00044	210	232	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++Cg+ F+ ++ + H + H XP_022993855.1 210 TCHKCGEQFNKWDAAEAHHLSkH 232 7*****************98877 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MPTVWLSLKK SLHCKSGPSE VHDPKSRRNL GAILTRKTGG GRSGCSRSIA NLKDVIHGGS 60 KRHLDKPPSC SPRSIGSSEF LNPITHEVIL TNSRCELKIT GFHGAFPPDV PASTDEPLTD 120 RPAASTFVGT LTPGTPGPGG HPTMHYFDPS FRSSSRKFPF REGFGSSNKS CGGGGGARSL 180 GGGGGGGVHT CNRISLETEI DGNRSSSAVT CHKCGEQFNK WDAAEAHHLS KHAVTELVEG 240 DSSRKIVEII CRTSWLKSEN QSGRIERVLK VHNMQRTLAR FEEHRETVKI KASKLPKKHP 300 RCLADGNELL RFFGTTVACS LGLNGSSSLC ISEKCCVCRI IRNGFSAKTE MKEGIGVFTT 360 STSARAFTSI EASGGGEEGG MVRKAMIVCR VIAGRVHRPL ENIQEMAGQT GFDSLAGKVG 420 LHSNIEELYL LNPRALLPCF VVICKA

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MPTVWLSLKK SLHCKSGPSE VHDPKSRRNL GAILTRKTGG GRSGCSRSIA NLKDVIHGGS  60
KRHLDKPPSC SPRSIGSSEF LNPITHEVIL TNSRCELKIT GFHGAFPPDV PASTDEPLTD  120
RPAASTFVGT LTPGTPGPGG HPTMHYFDPS FRSSSRKFPF REGFGSSNKS CGGGGGARSL  180
GGGGGGGVHT CNRISLETEI DGNRSSSAVT CHKCGEQFNK WDAAEAHHLS KHAVTELVEG  240
DSSRKIVEII CRTSWLKSEN QSGRIERVLK VHNMQRTLAR FEEHRETVKI KASKLPKKHP  300
RCLADGNELL RFFGTTVACS LGLNGSSSLC ISEKCCVCRI IRNGFSAKTE MKEGIGVFTT  360
STSARAFTSI EASGGGEEGG MVRKAMIVCR VIAGRVHRPL ENIQEMAGQT GFDSLAGKVG  420
LHSNIEELYL LNPRALLPCF VVICKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27240.1	1e-115	C2H2 family protein